| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3413 |
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| Symbol | |
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| ID | 5671784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 4042777 |
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| End bp | 4044030 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641242301 |
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| Product | RNA-directed DNA polymerase (Reverse transcriptase) |
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| Protein accession | YP_001507721 |
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| Protein GI | 158315213 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3344] Retron-type reverse transcriptase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.344584 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTGGAC CAGCATCGCG GGGAAAGTCG TTTGAGATCC CCAAACAGCT GGTGTGGGAT
GCCTGGCTGA AAGTGAAGGA AAACGGTGGG GCACCGGGGC CCGACGGAGT GACGGTCGAG
CAGTTCGAGG CGAACGTGAA GGATCGCCTG TACGTGCTGT GGAACCGCAT GTCGTCGGGG
TCGTACTTCC CCGGACCCGT CGGAGCGGTG GAGATCCCGA AGAAAGGTGT GAAAGGAGGA
GCAAGAACCC TCGGCATTCC CAATGTAGTA GATCGCGTAG CGCAGACGGT GCTAAAGCTG
GCTCTGGAGC CGAAGGTCGA GCCGGTGTTC CACCGGGACT CGTACGGCTA CAGACCAGGC
CGTTCGCAGC GCCAGGCGCT CGAGGTCTGC CGGAAGCGGT GCTGGTCGCA CGACTGGGTC
GTTGACTTGG ACGTGCGGAA GTTCTTCGAC ACCGTGCCGT GGGAAAAGCT GCTGAAGGCG
GTGGCGTACC ACACGGACCA GAAATGGGTC CTGATGTACG TGGAACGCTG TCTGAAAGCG
CCGACGAAGC ATGCCGACGG AACCCTGCAA GAGAGAACCA TGGGCACAGT CCAGGGTGGC
CCATTCTCCC CGCTGGCGGC TAACATCTAT CTGCACTGGG GCCTTGACGC CTGGATGGCG
CGCGAGTTCC CGACCGTTCC ATTCGAGCGG TGGGCGGACG ATGTTGTGTT TCACTGTGTG
AGCCTGGAAC AGGCCAGGGA AGTGCGGGAC GCGGTGGTGG CAAGGCTTGT CGAAGTCGGG
TTGGAAGCTC ACCCCGACAA GACCCGGATC GTGTACTGCA AGGACAGCAA CCGAGGTGGC
GACTATGAAA ACACGTCGTT CACGTTCCTG TCGTATACCT TCAGGCCACG AGTGGCATGG
AACGGCACCC AGAAGAAACG CTTCACCAGC TTCATCCCGG GTGCCGCGCC GGATCGGGTG
GCCTCGTTCA GCCGCGAAAT GCGCGACCTG AGGCTGCACA GGCGAACGAA CCTGACACTG
GATCAACTCG CCGCGGACAT CAACCCGAAA GTGGCGGGTT GGCTAGAATA TTTCACCATG
TTCTACCCGA GCGTGGTGCT ACCCATCGGC ACGCGCATTG ACAGCCATCT CGTGCGCTGG
GCGAGGAAGA AGTACAAACG GCTGACACGA AGTGAGCGTA GGGCGTGGGC ATGGCTCAAG
GGAGTCCGGG AACGGTCCCC TGACCTGTTT GCGCACTGGG CGTTGCGGTA CTGA
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| Protein sequence | MSGPASRGKS FEIPKQLVWD AWLKVKENGG APGPDGVTVE QFEANVKDRL YVLWNRMSSG
SYFPGPVGAV EIPKKGVKGG ARTLGIPNVV DRVAQTVLKL ALEPKVEPVF HRDSYGYRPG
RSQRQALEVC RKRCWSHDWV VDLDVRKFFD TVPWEKLLKA VAYHTDQKWV LMYVERCLKA
PTKHADGTLQ ERTMGTVQGG PFSPLAANIY LHWGLDAWMA REFPTVPFER WADDVVFHCV
SLEQAREVRD AVVARLVEVG LEAHPDKTRI VYCKDSNRGG DYENTSFTFL SYTFRPRVAW
NGTQKKRFTS FIPGAAPDRV ASFSREMRDL RLHRRTNLTL DQLAADINPK VAGWLEYFTM
FYPSVVLPIG TRIDSHLVRW ARKKYKRLTR SERRAWAWLK GVRERSPDLF AHWALRY
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