| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3403 |
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| Symbol | |
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| ID | 5671774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 4034026 |
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| End bp | 4035228 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641242291 |
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| Product | hydrogenase (NiFe) small subunit HydA |
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| Protein accession | YP_001507711 |
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| Protein GI | 158315203 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1740] Ni,Fe-hydrogenase I small subunit |
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| TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA)
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.643066 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAGCG AATCCGGCCG GCCTTTGTCC GCGCGGCTGG CGGACGCGGG GGTCGACCGG
CGGTCGTTCC TGAAATTCTG CGCGGGTATC ACCGCGACGC TCGCCCTGCC GGCCCAGTTG
GCGCCCCGGG TCGCCTATGC GCTGGACAAG GTTGACCGTC CCACCGTGAT CTGGCTGGAA
TTCCAGGACT GCGCCGGTGA CAGCGAGGCT TTCCTGCGTT CGCGCAACCC GTCGGCGGCG
GACCTGATTC TGGGGATGAT CTCGCTCGAC TACCACGAGA CGGTGATGGC GGCCTCCGGC
ACAGCCGCGG AGAAGGCCCG CGACGACGCG GTGGCGAAAG GCGGGCATCT CGTCGTCGTC
GAGGGCTCCA TTCCGACCGG AATTCCCGGG GCGTGCACGA TCGGCGGCAA GTCGGCCGAG
GACATCCTGC GTGAGGCGGT CCGTGGCGCG GCCGGCATCA TCAACGTCGG CACCTGCTCG
GCCTTCGGTG GGATCCCGGC GGCCGGGCCG AACCCGACCG GGGCGGTCCG GGTCGAGGAC
GTCGTCGGCG GGGTTCCGGT TGTGAACCTG ACCGGTTGCC CGGTCAACGC GGACAACCTG
ACCGCCACCA TCGTCCACCA CCTGACCTTC GGTGAGTTCC CGGCGCGGGA CAGGTTCAGC
CGGCCGCTGT TCGCCTACGG GCAGCGCATC CACGACACCT GCCAGCGGCG CGGCCACTTC
GACGCCGGCG AGTTCGCCGA GCAGTGGGGC GACGCGGGCC ACCGCAACGG CTGGTGCCTG
TACCGGCTGG GCTGCAAGGG GCCGAGCACC TTCCACAACT GTCCCAGCGT CCGGTTCAAC
GGGGGGACGT CCTGGCCGGT GGCGGCCGGG CACGGCTGTG TGGGCTGCTC CGAGCCGGGC
TTCTGGGACA CCATGTCGCC CTTCTACGAC CGGCTGCCGC ACGTGGCGAC CTCCGGTTTC
GACCTCACCG CCGACAGGAT CGGCGTCGGC GTGCTGGCGG CCACGGCGAC CGGCTTCGCG
GCGCACGGCG TCGGCAAGGT CGTCCAGCAC CGGGTCGCCG CCCGCCGCGA GAAGCAGGCC
GCGCGGGACC TGGTGGAAGA CGACGAAGCG CCCACAGACG AAGCGGCCAC AGACGAAGCG
GCCACAGACA AGGCACACGC CGACAAGGCG CACGGCGACG GAGAGACGGG CGAAGCGAGA
TGA
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| Protein sequence | MTSESGRPLS ARLADAGVDR RSFLKFCAGI TATLALPAQL APRVAYALDK VDRPTVIWLE
FQDCAGDSEA FLRSRNPSAA DLILGMISLD YHETVMAASG TAAEKARDDA VAKGGHLVVV
EGSIPTGIPG ACTIGGKSAE DILREAVRGA AGIINVGTCS AFGGIPAAGP NPTGAVRVED
VVGGVPVVNL TGCPVNADNL TATIVHHLTF GEFPARDRFS RPLFAYGQRI HDTCQRRGHF
DAGEFAEQWG DAGHRNGWCL YRLGCKGPST FHNCPSVRFN GGTSWPVAAG HGCVGCSEPG
FWDTMSPFYD RLPHVATSGF DLTADRIGVG VLAATATGFA AHGVGKVVQH RVAARREKQA
ARDLVEDDEA PTDEAATDEA ATDKAHADKA HGDGETGEAR
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