| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3401 |
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| Symbol | |
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| ID | 5671772 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 4032563 |
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| End bp | 4033651 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641242289 |
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| Product | hydrogenase expression/formation protein HypD |
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| Protein accession | YP_001507709 |
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| Protein GI | 158315201 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0409] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00075] hydrogenase expression/formation protein HypD |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGATACC TCGACGAGTA CCGCGACCCC GCCCTCGCGC GGCAGCTCCT CGACGAGATC
CACACGACGG CCACCCGGCC CTGGACCCTG ATGGAGGTCT GCGGCGGCCA GACGCACACC
ATCGTCCGCC AGGGCATCGA CAACCTGCTG CCGGCGGGCC TGCGGATGAT CCACGGGCCG
GGCTGCCCGG TGTGCGTGAC CCCGCTCGAA CTCATCGACA AGGCCCTGGC CATCGCCGCC
CGTCCCGAGG TCATCTTCAC CTCCTACGGC GACATGCTGC GGGTGCCCGG AACGGGGACC
GACCTGTTGG CCCTGCGCGC CCGCGGCTCC GACGTCCGCG TCGTCTACTC CCCGCTGGAC
GCGGTACGCC TGGCCGAACA GCACCCGGAC CGCCAGGTGG TCTTCTTCGC GGTCGGCTTC
GAGACGACCG CGCCGGCGAA CGCCATGGCG GTGCTGCGCG CCCACCAGCT CGGCCTGCCC
AACTTCAGCA TCCTGGTCAG CCACGTCCTC GTCCCACCGG CTATGACGGC GCTCCTCGAC
GCGCCCGACC GCCAGGTCCA GGGGTTCCTC GCCGCCGGCC ACGTCTGCGC CGTCATGGGC
TGGACGGAGT ACGAGCCCAT CGCGCACCGT TACCAGGTGC CCGTCGTCGT GACCGGCTTC
GAGCCGCTCG ACCTGCTCGA GGGCATCCTG ATGGCCGTCC GCCAGCTCGA GGCGGGCCAC
GCGCGGGTGG AGAACCAGTA CGCCCGCGCC GTCCACCGCG ACGGCAACAG CCGGGCGCGG
GAGGCCATCC GCCGCGTGTT CCGGGTGCGG GACCGCGCCT GGCGCGGCAT CGGCACCATC
CCGGACAGCG GCCTGGCCCT CACCGACGAG TTCGCCCGCT ACGACGCCGA GACCCGCTTC
GCCGTCTCCG GGCTGACCGC CCGGGAGCAT CCCGCCTGCA TCGCCGGCGA CATCCTCACC
GGCGCCCGCG AGCCGACCGA CTGCACCGCC TATGGGACGG CCTGCACGCC ACGCACCCCG
CTCGGCGCGC CGATGGTCTC CACCGAGGGC ACCTGCGCCG CCTACCACTC CGCCGGGAGG
GCGTCGTGA
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| Protein sequence | MRYLDEYRDP ALARQLLDEI HTTATRPWTL MEVCGGQTHT IVRQGIDNLL PAGLRMIHGP
GCPVCVTPLE LIDKALAIAA RPEVIFTSYG DMLRVPGTGT DLLALRARGS DVRVVYSPLD
AVRLAEQHPD RQVVFFAVGF ETTAPANAMA VLRAHQLGLP NFSILVSHVL VPPAMTALLD
APDRQVQGFL AAGHVCAVMG WTEYEPIAHR YQVPVVVTGF EPLDLLEGIL MAVRQLEAGH
ARVENQYARA VHRDGNSRAR EAIRRVFRVR DRAWRGIGTI PDSGLALTDE FARYDAETRF
AVSGLTAREH PACIAGDILT GAREPTDCTA YGTACTPRTP LGAPMVSTEG TCAAYHSAGR
AS
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