| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3397 |
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| Symbol | |
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| ID | 5671768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 4026654 |
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| End bp | 4028168 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641242285 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001507705 |
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| Protein GI | 158315197 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTCCA GTGCCGACAG TGGCGGTTCC GCCCCGGTCG CTACCCGTCG TGTGGACGAG
TCGCGCGTCA ACGCGATCAT CGCTGTCCTG GGCGGGATAG GCGTCGTCGT CGCGATGATG
CAGACGTTGA TGGTGCCGCT ACTGCCGACG CTGCCATCGC TGCTGCACAC CAGCTCGGCG
AACGCCTCGT GGGCGATCAC GGCCACGCTG CTCACCGCGT CCGTCGCCAA CCCGGTGTAC
GGGCGGCTCG GTGACCTCTA CGGCAAGCGG CGCATGGTCT TCGTCGCCGG CACCGCGCTC
GCCTGCGGCT CGGTGGTGTG CGCCCTGAGC AGCTCGCTCG TGCCGTTGCT GGTGGGCCGG
TCGATGCAGG GCCTCGGCAT GGCGATCATC CCGCTGGGCA TCAGCATCAT GCGTGACCTG
CTGCCGGCGA AGCGGCTGAT CCCCGCCATG GCGCTGATGA GCTCCTCGCT CGGGATCGGG
AGCGCGCTGG GCCTGCCGAT CGCGGCGGCG GTCGCCCAGC AGGCCAACTG GCACGTGCTG
TTCTGGGGCT CGGCTGTCGC CGTCGTCGCC CTGATGGTGC TGATCTGGCG GGTCGTTCCC
GAGTCGCCGG TCCGCGGCAC GGGCCGGTTC GACCTGCCGG GGGCGATCCT GCTCTCCGGA
GGGCTCGTCG CGCTGCTGCT CGCCGTGTCG AAGGGAAGCA CCTGGGGCTG GACCAGCACC
ACGACCCTCG GCCTGGGCAT GGTGGCCGCC GCCCTCCTCG TCGCCTGGAC CTGGTGGGAG
GCCCGCGCCG AGGCCCCCCT CGTGGACCTG CGCACCACCA TCCGGCGCCC GGTGCTGCTG
ACGAACACCG CTTCCGTTGC ACTGGGCTTC GCGATGTACG CGAACTCGCT GATCAACCCC
CAGCTGCTGC AGCTGCCGAA GGCCACCGGG CACGGGCTCG GCCAGTCGTT GCTCGCCACA
GGCCTGTGGA TGGCCCCCGT GGGGCTGGTG ATGATGGCCG TGTCGCCCAT CGCCGGCAGG
CTGATCACGG CACGCGGACC GAGGACCTCG CTCATCGCCG GCTCGGTCGT GATCGCCGGT
GGCTACTGCC TCGCACTTGG GCTCACCAGC AGCCCGCCGG GAGTCCTTCT CGTCAGCTGC
GTGATCAGCA CCGGCGTCGC ACTGGCTTAC GCGTCCATGC CCACTCTGAT CATGCAGTCC
GTGCCGGCCT CCGAGGGCGC CGCGGCGAAC GGCCTCAACA CCCTCATGCG CTCCATCGGA
ACCACGGGGG CGAGCGCGGT GATCGGCGTG GTCCTGGCGA ACATGACCAT CCCGTTCGGA
TCGACCCGGG TGCCCTCCCT CGCCGGCCTG CACGTCGGAT ACCTGATCGG CGCCGGTGCC
GCGCTGATCG CCGGCCTGCT GGCCCTCGGC ATCCCCGGCC GCGCGGCGTC GAAGTCGACC
GTCACGCTCC CGGAACCACG CCGGACGTCG CCGCAGGCGG CCCAGCCCGC GGCGACATCC
ACCTCAAGCG TCTGA
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| Protein sequence | MASSADSGGS APVATRRVDE SRVNAIIAVL GGIGVVVAMM QTLMVPLLPT LPSLLHTSSA
NASWAITATL LTASVANPVY GRLGDLYGKR RMVFVAGTAL ACGSVVCALS SSLVPLLVGR
SMQGLGMAII PLGISIMRDL LPAKRLIPAM ALMSSSLGIG SALGLPIAAA VAQQANWHVL
FWGSAVAVVA LMVLIWRVVP ESPVRGTGRF DLPGAILLSG GLVALLLAVS KGSTWGWTST
TTLGLGMVAA ALLVAWTWWE ARAEAPLVDL RTTIRRPVLL TNTASVALGF AMYANSLINP
QLLQLPKATG HGLGQSLLAT GLWMAPVGLV MMAVSPIAGR LITARGPRTS LIAGSVVIAG
GYCLALGLTS SPPGVLLVSC VISTGVALAY ASMPTLIMQS VPASEGAAAN GLNTLMRSIG
TTGASAVIGV VLANMTIPFG STRVPSLAGL HVGYLIGAGA ALIAGLLALG IPGRAASKST
VTLPEPRRTS PQAAQPAATS TSSV
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