| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3384 |
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| Symbol | |
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| ID | 5671755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 4009390 |
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| End bp | 4010163 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641242272 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001507692 |
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| Protein GI | 158315184 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGGAC TGGCGGACAA GGTCTTCATC GTGGCGGGCG GGGCCACCGG AATCGGTGCC
GGGGCGGCAA AAAGGCTCGC CGAGGAGAGT GCCAAGGTGG TAGTTGGCGA CATCAACCTC
GCCGGAGCGC AGAGCACCGT CAGAAAGATA AACGAGGCCG GCGGCAGCGC GGTCGCTGTC
CACTTCGACC TCGCCGACGA GCACTCGGTC AATGAGATGG TCGATACGAC GCTGGAGAAG
TTCGGCGCCG TCCACGGCCT GTTCAACGTC GGCGCGGACC TGTCGCCCGG CAACCTCGGG
CGGGACAAGT CGGTACTGGA CACCGATCTC GACGTGTGGC ATCGAACACT GGACGTCAAC
GTGGTCGGGT TCGTGCGGAC CATTCGCGCC GTCCTGCCTC ATCTGCTCGC GAACGGTGGC
GGTGGCATCG TCAACACCTC GTCCGGTGCG GCGGTCAGTG CAGGCGACCG TCTCCGGCCC
GCCTATGCGG CCTCGAAATC GGCGGTCAAT GCGCTCACGC GGCACGTCGC CGGGAACTGG
GGATCCAGGG GCGTGCGCTG CAACGGGGTG ATGCCGGGTC TGGTGATGGG CGAGACACAG
GAGATCCAGA ACGACGTCGC GCTCCAGGAG AGGTTCCTGA AAGAGGTCCC CACCACCCGG
CTGGGCCGTC CGAGCGATCT GGCCGCCGTC GTGTCCTTCC TGCTCTCGGA CGACGCCGAA
TGGATCAACG GTCAGGTCTG GGCGATCGAC GGCGGCGCCA ACATGCGTGC CTGA
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| Protein sequence | MRGLADKVFI VAGGATGIGA GAAKRLAEES AKVVVGDINL AGAQSTVRKI NEAGGSAVAV
HFDLADEHSV NEMVDTTLEK FGAVHGLFNV GADLSPGNLG RDKSVLDTDL DVWHRTLDVN
VVGFVRTIRA VLPHLLANGG GGIVNTSSGA AVSAGDRLRP AYAASKSAVN ALTRHVAGNW
GSRGVRCNGV MPGLVMGETQ EIQNDVALQE RFLKEVPTTR LGRPSDLAAV VSFLLSDDAE
WINGQVWAID GGANMRA
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