Gene Franean1_3378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3378 
Symbol 
ID5671749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4003346 
End bp4004359 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content65% 
IMG OID641242266 
Productaldo/keto reductase 
Protein accessionYP_001507686 
Protein GI158315178 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTGGATG AGGACATGGA GTACACCCGG CTGGGATCAT CAGGATTGAA GGTCAGCCGC 
ATCGCGCTCG GCTGCATGAG CTTTGGTAAG CCCAACACCG GGCGGGGCTG GGCGCTCGAC
ACGGATGCGG CGGAGCCGCT CTTCCGGCAG GCGGTCGAGC TCGGCATCAC GCTCTGGGAC
ACCGCGAACA TCTACGGTGT GGGCACCTCC GAGGAGATCA CCGGAGAGGC GATCGGGCGC
TACACGAGCC GTGACCAGGT CGTCATTGCC ACAAAGCTGT TCGCCCCGAT GAGTCAGGGG
CCTGGCGGAG GCGGTCTTTC CCGCCGCGCG GTGTTCGAGC AGATCGACGC CTCCCTGCGC
CGCCTCGGCA CCGACTATGT CGACCTGTAC CAGATCCACA GGTTCGATCC GGAGACGCCG
GTCGAGGAGA CAATGGAAGC TCTCCACGAC ATCGTGAAGG CGGGGAAGGT TCGCTATCTG
GGCGCCTCGT CGATGTGGGC CTGGCAGTTC TCCAAGATGC AGTACACCGC TGAGCTGCAC
GGCTGGACCA AATTCATTTC GATGCAGGAT CAGTACAGTC TTGTGGCGCG CGAGGAGGAG
CGCGAGATGT TCGGGCTGCT CGCCGACCAG GGCGTGGGCA GCCTTCCGTG GAGCCCGCTC
GCCGCGGGAC TCCTCACCCG GCCGTGGGGT GATGTGAGCA CGACTCGTGG GTCGTCCAAT
CCGACGACCG ACGGATCGGG CAGGCCCCTT TTCTTCGACA GCGACCGAGG CACGGTCGAC
GCGGTGCAGC AGATCGCGGA GACGCGAGGC GTCTCCATGG CACAGATCGC GATGGCCTGG
GTGCTGAAGA ATCCCGTCGT CACCGCGCCG ATCGTCGGCG CGACGAAACC ACACCACCTG
GCGGACGCGG TCGCTGCCCT GGACATCGAC CTCAGCGACA AGGAAGTAGC CGCGCTCGAG
GAGCACTACT CCCCGCGTCA GCCTACCTAC TACGGGTCGA AGTCCGGTTA CTGA
 
Protein sequence
MLDEDMEYTR LGSSGLKVSR IALGCMSFGK PNTGRGWALD TDAAEPLFRQ AVELGITLWD 
TANIYGVGTS EEITGEAIGR YTSRDQVVIA TKLFAPMSQG PGGGGLSRRA VFEQIDASLR
RLGTDYVDLY QIHRFDPETP VEETMEALHD IVKAGKVRYL GASSMWAWQF SKMQYTAELH
GWTKFISMQD QYSLVAREEE REMFGLLADQ GVGSLPWSPL AAGLLTRPWG DVSTTRGSSN
PTTDGSGRPL FFDSDRGTVD AVQQIAETRG VSMAQIAMAW VLKNPVVTAP IVGATKPHHL
ADAVAALDID LSDKEVAALE EHYSPRQPTY YGSKSGY