Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_3347 |
Symbol | |
ID | 5671718 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 3959043 |
End bp | 3960662 |
Gene Length | 1620 bp |
Protein Length | 539 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641242235 |
Product | band 7 protein |
Protein accession | YP_001507655 |
Protein GI | 158315147 |
COG category | [S] Function unknown |
COG ID | [COG2268] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.953991 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCCTGGT ACGGGTGGCT GCTGCTGGTC ATTTTTCTCG GCGGTGGGGG GTATCTTCTC TTCATCGGGC TGATAAAGGT ACCGCCGGGC CAGGTGGGAG TCGTTCGGGT ACGGTTTGCC CCGAGCCACC CGGACGACGC ACGCCGGCGG GTGAAGGTGC ATGGCTCGCC AGGGGTGCAG GCCGAGCTAC TGAAGGCCGA CTGGCTCTAC TTCCGGCCAC CGGTGCTGTA CCAGATCAGC TATCGGGAAA GGACCAGGGT CCCGCCGGGA ACGATCGGCG TGGTCGTGGC GAGGGACGGG GAGACGGCTC CGGTGCACGA GGCGCTTTCG AGGCACGTCG AATGCGACTC CTTTCAGGAC GGGCGCGCCT TCCTCTGCAA CGGGGGCCAG AAGGGAAGAC AGCCAGCGGT GTTGCCGGTC GGCGAGTACG ACATCAACCC GGAGCTCTTC GACGTCGTGA CGGTGGAGAC GATCGGGTCT GGCCGGTACG GCCTCACCGA GAACGACCTG AGAGAGATCG ACGTTCAGGT CGGAACCGCC GGAGTCGTGA TCGTCCGCGT CGGACAGATG TACGACGACA GCAACGCCGC GGTCGCGCCG CGGGTACCCG GCCATCGCAG TTTCCAGTAC CCCTGGGCTT TCCTCGAGAA CGGTGGTTGC CAGGGGGTAC AGGAGGAGAC GCTCCCCGGC GGCGGGAGCT ATCAGATCAA TCCGTGGTTC GCCCGCGTGG TCCTCATCCC CACCCGGGTC CTCGTCCTGG AGTGGAGCAG GAAGCGGCAG GAGGAGAGCC GCTTCGACTC GGCGCTCGAC CAGATCGTGG TCAACGTCGG AGGATTCCCG ATCCGGTTCG ACATGCAGCA GACCATCCAG ATTCCGGCCA GAGCGGCGCC GCGGCTGGTG AGCCAGTTCG GCGAGCAGGA GAAACATCCG GTCGAGCCGG ACGACGACGT GACGAGACCC GCCCCGGTGC GCCGGTTCGT CGAGCGTGTG CTGGGGACGA CGGCCGAGGG ATATTTTCTG AGTACGGCCA GCGAGTACAA GGTGCTCGAC TTCCTGAACA GTCACAACGA GGTTCGGCTG GAGGTCGAGC AGAAAGTCCG CCAGGCGCTT GACGAATGGG ATATCGAGGC GGTCCGCACC ACCCTCGGCG AGTTCGAACC ACCCGCGAAC CTTGACGAGA TCCGCCGGGC GATCGCCAGC GAGCGGGAGC ACGCACGTAT CCACCGGCAC GAGCTGGAGA ACGCGAGAAT CAAGGCGGAG ATCGTCCGGG TCCAGGCGGA GAGCGAAGCG GTCGCCAAAG GAATCCGGAG CACAGCGGAG GCGGAGCACA TCCAGAAGCT GGCGGCGGCG GAGCTCGAGG CGAGGATCCA GCTTCTGGGC CAGGATGTCG TGGCGATGGA GCTCCTCCTG GCACAGCTCT CGAAAATGAA CGTGCCGACC TATGTCGGCG GCGACGCGAC CGCGCTGCTA CAGCACATGC CCCTGGAAGC CGCACGCGAA ATGATCAACA ATGCGATCGC CCGCGTCCAG CAGAAGGAGG TGGCTGGCGC GCCGCCGCGT CCCGGCCCAC CCGACGACGG CGCCGCCAGC GAACTGACAG CCGGTACCGG TCCGATCTGA
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Protein sequence | MPWYGWLLLV IFLGGGGYLL FIGLIKVPPG QVGVVRVRFA PSHPDDARRR VKVHGSPGVQ AELLKADWLY FRPPVLYQIS YRERTRVPPG TIGVVVARDG ETAPVHEALS RHVECDSFQD GRAFLCNGGQ KGRQPAVLPV GEYDINPELF DVVTVETIGS GRYGLTENDL REIDVQVGTA GVVIVRVGQM YDDSNAAVAP RVPGHRSFQY PWAFLENGGC QGVQEETLPG GGSYQINPWF ARVVLIPTRV LVLEWSRKRQ EESRFDSALD QIVVNVGGFP IRFDMQQTIQ IPARAAPRLV SQFGEQEKHP VEPDDDVTRP APVRRFVERV LGTTAEGYFL STASEYKVLD FLNSHNEVRL EVEQKVRQAL DEWDIEAVRT TLGEFEPPAN LDEIRRAIAS EREHARIHRH ELENARIKAE IVRVQAESEA VAKGIRSTAE AEHIQKLAAA ELEARIQLLG QDVVAMELLL AQLSKMNVPT YVGGDATALL QHMPLEAARE MINNAIARVQ QKEVAGAPPR PGPPDDGAAS ELTAGTGPI
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