Gene Franean1_3344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3344 
Symbol 
ID5671716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3957886 
End bp3958290 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content73% 
IMG OID641242233 
ProductMarR family transcriptional regulator 
Protein accessionYP_001507653 
Protein GI158315145 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGCTGA CCCGCCTGTC GCGGCTCGTC CACCGGGCCA GCACGCCCGA CCTGCTCGGG 
ATCAGCCTCA AGGACATGGC GGCCCTGGCC TACCTGCGCG ATCACGCCGG CACCACCCAG
CAGGCCCTGA CCGAAGGCCT GTGCATCGAC GCCAACTACT GCGTCCTGCT GCTCAACGAG
CTGGAGGCCG CCGGCCTGGC CGAGCGGCGC CGCGACCCGG CGGACCGCCG CCGCCATCTC
GTCACGATGA CCGAGACCGG CCGCGAGGCG CTCGAACGGG CCGAGCAGGC TCAGGAGAGC
GTCGAGGACG AGATCCTCGC CGGCCTCAGC CGGGAGGAAC GGGTCACCCT CGCCCGCCTG
CTGGGCCAGG CGCTCGACGG CGCCATCCGC CGGCCCAACC TGTAA
 
Protein sequence
MLLTRLSRLV HRASTPDLLG ISLKDMAALA YLRDHAGTTQ QALTEGLCID ANYCVLLLNE 
LEAAGLAERR RDPADRRRHL VTMTETGREA LERAEQAQES VEDEILAGLS REERVTLARL
LGQALDGAIR RPNL