| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3341 |
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| Symbol | |
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| ID | 5671713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 3953925 |
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| End bp | 3955478 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641242230 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_001507650 |
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| Protein GI | 158315142 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.987085 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGCCG AAGCTCGGGA CGCGGACCGG CTCGACCCGC CGCTGCGACG CCTGATCGCC
GTGGTTCTGC TCGGCGGGAT CATGGGAATC CTCGACGGGT CCGTCGTCGC CGTCGGTGTC
GACACCCTCG CCGCGCGGTT CCACGCCTCG CTGAGCACGA TCGGATGGGT CTCGACCGGA
TACCTCCTGG CCCTCACCAT TGCCATCCCG ATCACCACCT GGGCTGTCGA CAGGTTCGGC
GCGCGCCGGC TGTGGCTGAC CGCCCTCGTC GTCTTCCTGT CCGCCTCCCT GGCCTCCGGT
CTCGCCTGGA ACATCACCAG CCTGATCGTC TTCCGGGTCA TCCAGGGCCT TGCCGCCGGC
GTGCTCGACC CGCTGGTGCT GACCCTGCTC GCCCGCGCCG CGGGACCACG CCGCGCCGGC
CGGGTCATGG GGTTGATGGG CATGGTGCTC TCGGCCGGCC CGGTGCTCGG CCTGATCGTC
GGTGGGATCG TCCTGGAGAG CGCCTCCTGG CGATGGATGT TCCTGATCAA CCTGCCGGTC
GGGGTCGTGG CCCTGCTCGG CGCAGCCCGT GCGGTACCTG CCGACCCGCC ACGCCAGACG
CCCACCAGCC GCCTCGACGT CCTCGGTGTC GCGCTGATCG GCCCGGGGTT CGCCGCCGTG
GTCCTCGCGT TGACGCAGGC GGCTGACCGC ACCGCCGTCG TCGCCTGGCA GGTGCTCGTC
CCGCTCGTCG CGGCGGTGAC GCTGCTCGCC GGCTACGCCG TGCACGCCCT GCGTGGACGT
CCGCACCGGA GCACGCCACC CCTGATCGAC CTGCGCCTGT TCGCCAGTCC TGGATTCGCC
GCGAGCGTGG CCGTCATGAC TCTGGTGGGC CTGACGATGT TCGCGAACCT CTTCGTGCTC
CCGCTCTACT ACCAGCAGCA GCATGGACGG GGCGCGCTCG GGGCCGGGCT GCTGGTGGCA
CCCTTCGCGG TGGCCGCCGT CATCTGCATG CCCCTGTCCG GGCGGCTGTC CGACCGGCTC
GGCCCTCGGG CCCTCGTCCG GGGCGGGGCG GTTGTCGCGG TACTCGGCCA ACTGGCGTTC
ACCGGGATCG GCGCGCACAC CAACGAGGTG TGGCCCGCGC TCGCCGCGTT CGTGGTCGGC
GCGGGGCTGA GCTTCGTCGG CGCGCCCACC ATGGGATCCC TGTACCGGAC GCTGCCTCCG
GAGTCCGTGT CCCAGGGCAG CTCCGTGCTC TACATCCTCA ACCAGCTCGG CGCGGCCATC
GGCATCGCCG TCGTCACCCT GATCCTGGCG ACCGTTGGGC CGGAGAACAC CCGCGGGATG
GCGGGGTTCC ACGGTGTCCA CTGGTTCGCG CTGGCGGCCG TCGCCGTCAT CCTCGCCATG
AGCGCGTTCC TCCCCCGGCG AGACGCGACG ACCGAGGCGG CGGTCCCGGC CGCAGGTGCC
GCGACCGCGA CCGCGACCGC GACCGCGACC ACGTCGACGT CGACGTCGAC GTCGACGTCC
GGGACGGTCC CGCCAGCCCT GTCCGCCGCG ACCGCCCAGG AGGGCACCCG ATGA
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| Protein sequence | MSAEARDADR LDPPLRRLIA VVLLGGIMGI LDGSVVAVGV DTLAARFHAS LSTIGWVSTG
YLLALTIAIP ITTWAVDRFG ARRLWLTALV VFLSASLASG LAWNITSLIV FRVIQGLAAG
VLDPLVLTLL ARAAGPRRAG RVMGLMGMVL SAGPVLGLIV GGIVLESASW RWMFLINLPV
GVVALLGAAR AVPADPPRQT PTSRLDVLGV ALIGPGFAAV VLALTQAADR TAVVAWQVLV
PLVAAVTLLA GYAVHALRGR PHRSTPPLID LRLFASPGFA ASVAVMTLVG LTMFANLFVL
PLYYQQQHGR GALGAGLLVA PFAVAAVICM PLSGRLSDRL GPRALVRGGA VVAVLGQLAF
TGIGAHTNEV WPALAAFVVG AGLSFVGAPT MGSLYRTLPP ESVSQGSSVL YILNQLGAAI
GIAVVTLILA TVGPENTRGM AGFHGVHWFA LAAVAVILAM SAFLPRRDAT TEAAVPAAGA
ATATATATAT TSTSTSTSTS GTVPPALSAA TAQEGTR
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