Gene Franean1_3329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3329 
Symbol 
ID5671701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3941458 
End bp3942177 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content70% 
IMG OID641242218 
Productesterase 
Protein accessionYP_001507638 
Protein GI158315130 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.216575 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACAT ATGTCCTGGT GCACGGCGGT GGTCACGGCG GCTGGTGTTA CCAGCCGGTC 
GCCCGGCTGC TGCGTGCCGC CGGGCACGAG GTCCACACCC CCACCCTCTC CGGTCTGGGC
GAGCGCGCAC ACCTGGTGAG CACGAAGATC GACCTCGACT TACACATCCA GGACGTCGTC
GCGCTGCTGC ACTACGAGAA CCTGCGCGAC GTGATCCTCG TCGGGCACAG CTACGGCGGC
ATGGTCATCA CCGGCGTCGC CGACCGGGCC GCCGACCGCA TCGGCCGCCT CGTTTACCTC
GACGCGGCGA ACCCGGTCAA CGGCCAGTCC CTCCTCGACG TCGCCGGACC GATCATCGAG
ATGACCCGCC CCCACGGCCA GACGGTCGAC GGCGTCGAGC TGGTTCTCCT GCCGGCGCCG
GGCGCAGGCG CCTTCTACGG CGTGACCGAC CCGGACGACC TCGCCTGGAT GGACGAACGC
CTCACCGCCC ACCCCTGGCG CTGCTTCGAA CAGCCCCTGA CGCTCACCAA CGAGACGGCC
CTCTGGGCGA TCCCGCAGTA CCACGTCATC TGCACCTCCA CCCTGGCCGG CCGGGACCCG
GAGCTCATGG ACAAGGCACG AGCCAGCGGC CGCCTCTGGA CCGTCGACAC CGGCCACGAC
CTCATGATCA CCGAACCCCG GGCGGTCGCC GACGCGCTTC ACGAGGTCGC CGACGCCTGA
 
Protein sequence
MATYVLVHGG GHGGWCYQPV ARLLRAAGHE VHTPTLSGLG ERAHLVSTKI DLDLHIQDVV 
ALLHYENLRD VILVGHSYGG MVITGVADRA ADRIGRLVYL DAANPVNGQS LLDVAGPIIE
MTRPHGQTVD GVELVLLPAP GAGAFYGVTD PDDLAWMDER LTAHPWRCFE QPLTLTNETA
LWAIPQYHVI CTSTLAGRDP ELMDKARASG RLWTVDTGHD LMITEPRAVA DALHEVADA