| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3325 |
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| Symbol | |
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| ID | 5671697 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 3938191 |
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| End bp | 3939000 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 641242214 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001507634 |
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| Protein GI | 158315126 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.535186 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGCCG ACCGCCCCGT CGCCGTGGTC ACCGGGGCGG CGCGCGGGAT AGGCGCGGCC
ACTGTGCTGG CGCTGGCGCA GCAGGGCTGG GAGGTGCTCG CGGTCGACCG CGGGAAGGAC
GATCCCGCGC TCGCCTACCC GATGGGCACC GAGGCCGAGC TCGGGGAGGT GGTGGCGGAG
GCGAACTGGC GGGTCGAGGC GGCGGACCGG GTCCGCCCGT TCATCGCCGA CGTACGGGAC
GCCGCCGCGC TCCAAGCCGC CGTCGCCGAG GCCGAGGCCC GGTGGGGTGG CCTGGACGCC
GCCGTCGCGG CCGCCGGGGT GATCGCCGGC GGCGTGCCGC TGTGGGAGGT CCCGGCGGAG
CAGGAACAGG CCGTGCTGGA CGTGAACCTC GGCGGTGTCC TGAACCTGGC TCGGGTGGCC
GTGCCCGCGA TGCTGCGGCG GCCACCGCCG CGGCACGGCC GTTTCCTGGC GGTGGCGTCG
GCCGCGGCGA CCCGCGGGCT GCCGATGCTG GCCGCCTACT GCGCGGCGAA GGCCGGCGTC
ACCGGGCTGG TCCGGGCCCT GGCAGCCGAG CTGGGAGACA CCGGTGTCAC CGCGAACGCG
GTCAGTCCGG GCTCCACCGA CACACCGATT CTGGCCGAGA GCGCCCGCCT GTACGGCCTC
AGCGGGGCGC CGGAGTTCGC CGCGCAGCAA CCGCTCCGAC GGCTGCTCGC CCCGGCGGAG
GTCGCGGAGG TCCTCGCCTT CCTCGCCGGA CCGGCCAGCA GCGGGATGAC CGGTGCCGTC
GTACCGGTCG ACGGAGGCCT CGCGCTGTGA
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| Protein sequence | MTADRPVAVV TGAARGIGAA TVLALAQQGW EVLAVDRGKD DPALAYPMGT EAELGEVVAE
ANWRVEAADR VRPFIADVRD AAALQAAVAE AEARWGGLDA AVAAAGVIAG GVPLWEVPAE
QEQAVLDVNL GGVLNLARVA VPAMLRRPPP RHGRFLAVAS AAATRGLPML AAYCAAKAGV
TGLVRALAAE LGDTGVTANA VSPGSTDTPI LAESARLYGL SGAPEFAAQQ PLRRLLAPAE
VAEVLAFLAG PASSGMTGAV VPVDGGLAL
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