Gene Franean1_3301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3301 
Symbol 
ID5671673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3912153 
End bp3913658 
Gene Length1506 bp 
Protein Length501 aa 
Translation table11 
GC content75% 
IMG OID641242190 
Productcarbohydrate kinase FGGY 
Protein accessionYP_001507610 
Protein GI158315102 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1070] Sugar (pentulose and hexulose) kinases 
TIGRFAM ID[TIGR01314] gluconate kinase, FGGY type 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTTCTCG GCGTCGACGT CGGCACGACC GCCACGAAGG TCGTGGCCTT CGACCCGGAC 
GGCCGCGAGC ACGCCAGTGC GAAGGTCGGC TATCCCCTGC TCGAGCCCCA CCCCGGTGAG
GCCGTGCAGG ATCCGGACGT CATCAGGGCG GCGGTGGCCG AGGCGATCAG GGAGGCGGCA
CGGCAGGCCA CGGACGCCGG CCACCGGGTC GGCGGCCTCT CCTTCTCCGC CGCGATGCAC
ACGCTCATCG GCATCGACGA CGTCGGCCGG CCACTGACCC CGTCACTCAC CTGGGCGGAT
GCCCGGGCTG CGGCACAGGC CGAACGGCTG CGCGCCGCCC ACGGCCTGGA GCTGCACCGC
CGGACCGGCA CGCCGACGCA CCCGATGTCC CCGCTGGCCA AGCTCGTGTG GTTCCGCGAG
CAGGACCCGG AGATCTTCGC GGCGGTGCGC CGCTGGGTGG GGATCAAGGA GTACATCCTC
GCCGACCTGT GCGGCGAGTG GCTCGTCGAC CACTCGGTGG CATCCGCCAC CGGGCTGCTC
GACCTGGCCG CCCTCGACTG GGACAGCGAG GCGCTGGACG TCGCCGGCAT CGACCCGGCC
CGGCTGTCCC GTCTCGCCGC GACGACCGAG GTCCTCCCCC GTCTCACCCC GGCCGCGGCC
GAGGCACTCG GGCTGCCGGC CGCGACGCCG GTGGTCGTCG GCGCGAGCGA CGGGGCACTG
GCGTCGCTCG GGGTGGGAGC GGTGCACGGC GGGGTCGCGT CCTGCTCGAT CGGGACGAGC
GCCGCGATCC GGGTGATGGT CGACCGGCCG ACCGTCGACC CGTCCGGGCA CCTCTTCTGC
TACGCCCTCG CGCCGGAGCG CTGGGTCATC GGCGGGGCCA TCAACAACGG CGGGCTGGTA
CTGCGGTGGG CACGGGACGC ACTGGCGCCC GACCTGGAAG ACGAGGCGGC CGTGCTGGAC
ATCGCCGCCC GGGCCCCGGC GGGCTCCGAC GGGCTGCTGA TGCTGCCGTA CCTGACCGGG
GAGCGGGCGC CGCACTGGGA CTCGCTCTCC CGCGGGGCCT ACATCGGGCT GACTCGGGGG
CACCGCCGCG AGCACCTCGT CCGGGCGGCA CTCGAAGGGG TCTGCCTGCA GCTCGCGCTG
GTCGCGAAGT CCATCCGGGA CGCCGGGATC GAGGTCTGCG AGACGCGGGC GACCGGCGGT
TTCGCCCGCA GCGCGCTGTG GCGGCAGATC CTCACCGACG CCCTCGGCAT GGACGTCGGC
TTCCCCGCGA CCCGGGAGGG CACGAGCTTC GGCGCGGCAC TGCTGGGGAT GGCCGCCCTC
GGCATGGTCG AGAACCTCGA CGCGGCGGCC GACCTCGTGC CGGTCGGTGG CATCCACCGC
CCCGAGCCGG CGTCCGCGGC CATCTACCGC ACGCTGCTCC CGGTCTTCGA GTCGCTCCAC
GAGGCCCTCG TCCCGGCGTT CCGCACGCTG CGGAACCTCG GCCGGCCCGG CCATGGAACC
CACTGA
 
Protein sequence
MVLGVDVGTT ATKVVAFDPD GREHASAKVG YPLLEPHPGE AVQDPDVIRA AVAEAIREAA 
RQATDAGHRV GGLSFSAAMH TLIGIDDVGR PLTPSLTWAD ARAAAQAERL RAAHGLELHR
RTGTPTHPMS PLAKLVWFRE QDPEIFAAVR RWVGIKEYIL ADLCGEWLVD HSVASATGLL
DLAALDWDSE ALDVAGIDPA RLSRLAATTE VLPRLTPAAA EALGLPAATP VVVGASDGAL
ASLGVGAVHG GVASCSIGTS AAIRVMVDRP TVDPSGHLFC YALAPERWVI GGAINNGGLV
LRWARDALAP DLEDEAAVLD IAARAPAGSD GLLMLPYLTG ERAPHWDSLS RGAYIGLTRG
HRREHLVRAA LEGVCLQLAL VAKSIRDAGI EVCETRATGG FARSALWRQI LTDALGMDVG
FPATREGTSF GAALLGMAAL GMVENLDAAA DLVPVGGIHR PEPASAAIYR TLLPVFESLH
EALVPAFRTL RNLGRPGHGT H