Gene Franean1_3283 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3283 
Symbol 
ID5671656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3890645 
End bp3891481 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content74% 
IMG OID641242174 
Product6-phosphogluconate dehydrogenase NAD-binding 
Protein accessionYP_001507594 
Protein GI158315086 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGTCC TGCCCCGAGT CGGTTTCGTC GGACTCGGCG CCCAGGGCGG CCCGATGGCC 
CGCCGCATCG CCGACGCCGG CTTCCCGACC ACTCTGTGGG CGCGTCGACC GGAAAGCCTC
GCGCCCTATG CCGGGACGGC GGCCCGCGTG GCCGGAAGCC GCAGGGAGCT CGGCGCGGCC
AGTGACGTGC TCTGCGTCTG CGTGGTGGAC GACGCCGGTG TCGACGAGGT GCTCCGCGGT
CCGGAGGGGG CGCTGGCCGG CATGGCGGAC AGCGGCGTGG TGATCATCCA CAGCACCACG
CATCCGGACA CCTGCCGCCG GCTCCAGACG GACTTCCCGA ACCTGCGCGT CCTCGACGCG
CCCGTGAGCG GCGGCGGTGT GCGGGCCCGC GAGGGCACGC TGCTCGTCAT GGTGGGCGGC
GACGCCAGCG TGCTCGAACG GGTCCGGCCG GTGCTGGACA CGTTCGCGAA GCCGCTGCTG
CACATCGGCG CGCTGGGGAC GGGTCAGGAA GTCAAGCTCC TCAACAACGC GCTCTTCGCC
GCGCACCTCG CTCTCGCCGC CGAGGTGTAC ACGCTGGCGC ACGGCCGCGG ACTCGATGTG
GAGGGCGTCG CGACCGTCCT GAACGCGGGC AGCGGGAGGA GCTTCGCCGC CGACGTCGTG
GCGGCGGCCG TGCATCGACT CGAGCCCCTG GCCGGCCGCG CCGGGTCCCT GCTCGCCAAG
GACGTCGGCA TCCTCGCCGA CCTGCTCTCC CCGAACCCCT CCGAGCTCAT CGCCGTGGCC
GACACCGCGC TCGAAGTCAT GGGCGTCCCC AGGCCCGGGA GAAAGGACCC CGCATGA
 
Protein sequence
MTVLPRVGFV GLGAQGGPMA RRIADAGFPT TLWARRPESL APYAGTAARV AGSRRELGAA 
SDVLCVCVVD DAGVDEVLRG PEGALAGMAD SGVVIIHSTT HPDTCRRLQT DFPNLRVLDA
PVSGGGVRAR EGTLLVMVGG DASVLERVRP VLDTFAKPLL HIGALGTGQE VKLLNNALFA
AHLALAAEVY TLAHGRGLDV EGVATVLNAG SGRSFAADVV AAAVHRLEPL AGRAGSLLAK
DVGILADLLS PNPSELIAVA DTALEVMGVP RPGRKDPA