Gene Franean1_3266 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3266 
Symbol 
ID5671640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3865940 
End bp3867658 
Gene Length1719 bp 
Protein Length572 aa 
Translation table11 
GC content65% 
IMG OID641242158 
Producttannase and feruloyl esterase 
Protein accessionYP_001507578 
Protein GI158315070 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGTGA CGGCTGTGCT CCTGCCGTCC GCTCTCGCGC AGGCAGCCCC GCCTTCGTCG 
TCCGCCGTCC CGCTGCTCAG CGGCGTCACC TGCGCGTCGC TCGCTCCGGG TTCCGGGGGA
CAGGTGACAA TACCGGCCAG CAGCATCGGC CTGCCCACCC TGGGCGCGAC CATCGACTCC
GCCACCCTCG TGCCCGCCGG GACGGTCAAC GGAGTCAGCC GTCCCGAGTA CTGTGACGTC
AGGGGCACAA TCCTCTCGGT CGATCCACAG GCGGAGGACA TCAAGTTCGC GGCCGCTGTC
CCCACGGCGT GGAACGAAAA AGCCTGGCAG TTCGGTGGAT CGGGGCTGAA CGGGTTCGTG
CCCGACGTGA TCGGTGCCAG CTACGGATCG CCGTCCTCGG TGCCACCGCT CTCCACGGGC
TACGCCGTCT ACGGCGGCGA CTCCGGCCAC GCGGGGCAGA CTCCCGGCCC CTGGATCACC
AACGACGAGT CGTGGCTGAA CTACGCCCAT CAGGGTATCA AGAAGACCCA TGACGCGAGT
ATCTGGATTC TGAAGAAACT GTACGGCAGG GGTCCCACGG CCAACTACTA CATCGGTACC
TCGGGGGGTG GCCGTGAAGG CCTGATCGCC GCGAACCGTT ACCCTGGAGA CTACCAGGGT
ATTGCCGCCA ACATGCCGGC GGTCGATCTC TCCAACATTT TCTACGATCC GGCCTACAAG
GGCAAGATCC AGCTGAACCC CGCCAACTAC CTGCCGCCCA CCAAGGCGAA CGCGGTGGCG
ACGTACGTGT TGTCGAAGTG CGACGCGCTC GACGGCCGGA CCGACGGTGT CATCAACAAC
TACCTGGACT GCAGCTACCG CCTTGACGTG ACGAGGACCG CACAGCCGTT CCAGGGCCTG
CTCTGCAGCG GTGCGGAGAC CGACAACTGC CTCACGGCGG CGCAGATCAC CACGCTCGAA
TCCTTCTACA AGCCGGTTCA GTACCCGTAT GCGCTGGCCG GTGGCAGGAC CACGTTCGCG
GGCTACCCCG GAGGCATGGA GAACCTTCCT CCGCTCGGCC CGTTCGGCCC GCAGACCCCA
TGGTTGTTCA GCCCGACCGC ACCGGCGGCC CACGACCCGG CGTATTTCGG CGGTGGCGGT
GGAGTTCTCG GTGGGCCGGT CACGCAGATG TGGTTGGCCA AGCGCATGGG CAACCCGAAC
TTCAGTCTTC TTGACCTGGA TCTGACGACG CACAAGACAC ATCTGCAGCT GTACTCGGAG
CAGTTGGACA TCGCGACGGA CATCCGTACC TACCTGAGGG CCGGTGGAAA GATCGTCATC
GTGACGAACG GCTCTGACGC CGTCGCGAAC TCCCGCGCGC AGATGGAGTA CTACAACAGA
TTGCTGACCA ACCTGGTCAA CGGTGGTCCC GCCGCGGTGA AGGCCTCGGT CAAGTACTAC
GTCCTGCCCA ACCAGGGGCA CTCGTACGGT GGCGTCGACG CGCAGGGGAA CCTCATTCCG
GACAACGTCG ACGTGCAGTC GCTGATCCAG AACTGGGTCG AGAACAACGT CGTTCCGGGC
GCGGCGCCGG TCGCCACCAC CCGAGCGGGA ACGGCGACGA AGCCGGTCTG CATCTTCCCC
AGCTACCCGC GTTACAAGGG CTCCGGGGAT CCGGCGGCCG CGTCGAGCTA CGTGTGCACG
AAGGCCCTGT ACGCTCCCAT CGTCGCACCT CTCGCCTGA
 
Protein sequence
MAVTAVLLPS ALAQAAPPSS SAVPLLSGVT CASLAPGSGG QVTIPASSIG LPTLGATIDS 
ATLVPAGTVN GVSRPEYCDV RGTILSVDPQ AEDIKFAAAV PTAWNEKAWQ FGGSGLNGFV
PDVIGASYGS PSSVPPLSTG YAVYGGDSGH AGQTPGPWIT NDESWLNYAH QGIKKTHDAS
IWILKKLYGR GPTANYYIGT SGGGREGLIA ANRYPGDYQG IAANMPAVDL SNIFYDPAYK
GKIQLNPANY LPPTKANAVA TYVLSKCDAL DGRTDGVINN YLDCSYRLDV TRTAQPFQGL
LCSGAETDNC LTAAQITTLE SFYKPVQYPY ALAGGRTTFA GYPGGMENLP PLGPFGPQTP
WLFSPTAPAA HDPAYFGGGG GVLGGPVTQM WLAKRMGNPN FSLLDLDLTT HKTHLQLYSE
QLDIATDIRT YLRAGGKIVI VTNGSDAVAN SRAQMEYYNR LLTNLVNGGP AAVKASVKYY
VLPNQGHSYG GVDAQGNLIP DNVDVQSLIQ NWVENNVVPG AAPVATTRAG TATKPVCIFP
SYPRYKGSGD PAAASSYVCT KALYAPIVAP LA