| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3260 |
|---|
| Symbol | |
|---|
| ID | 5671634 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 3860775 |
|---|
| End bp | 3861689 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641242152 |
|---|
| Product | luciferase family protein |
|---|
| Protein accession | YP_001507572 |
|---|
| Protein GI | 158315064 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
|---|
| TIGRFAM ID | [TIGR03564] F420-dependent oxidoreductase, MSMEG_4879 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTATCG GTCTGGGTGG CGGCGGCTCG ACACCGGACA GGCTCCTCGC GCAGGCGAAG
CAGGCCGAAA CCGACGGCTT CCAGTCACTG TGGTACGCAA GTGTCGTCCA GGGTGACCCG
CTCGCCGCGA TGGCTCTCGC CGGCCGCGAG ACGTCCACGG TCGAGCTCGG CACCGCCGTG
CTGCAGACCT ACCCGGTCCA CCCGCTGCTC CAGGCCCAGC GGATCGCCGG CGCCGCGGCC
GTGCTGCGCC GGCCCGGCCT GACCATCGGT CTCGGCCCCT CACACCAGGG GTTCGTCGAG
GGCATCTACG GCCTGTCCTA CACCCGTCCC GGCCTGAACA CCGAGGAGTA CCTGCGGATC
CTGATGCCGC TGCTGCGCGG CGAGGGCGTC GACTTCGAGG GCAAGGAATG GAGCGCCCAC
GTGCCGGCCG GGATGGTCCG GCCCGCTCAC CCGGTCCCGG TGCTGCTGGC GGCGCTCTCG
CCACGAATGC TGCGCATCGC CGGTGAGCTC GCCGACGGCG CGATTCTCTG GATGGCCCCG
ATCCAGGCGA TCGAGAACCA CGTCGCACCG CGTCTGCTCG CCGCCACCGA GGCCGCGGGC
CGACCGGCGC CGAGAATCGT CGCGGGCCTG CCGGTCGTGG TACACGACGA CGAGCAGGAG
GCCCGGGCGG CCGTCGCCGC CGGCTCCGCC GCGTACGCGA CGTCGCCCGC CTATCAGCGG
ATCATGAAGG TCGGCGGCGC CGACGGCCCG GCGGACGCCG CGATCGTCGG CGACGAGAAG
TCGGTCGAGG CCCAGCTGCA CGCCCTGTTC GACGCCGGAG CCACCGACTT CCACGCCCAC
ATCGTCCCCG CGGGCCCCGA CCTGCGTGCC TCGTTGAAGC GCACCCGCGA CCTGCTCAGC
TCGCTGGCCG GCTGA
|
|---|
| Protein sequence | MRIGLGGGGS TPDRLLAQAK QAETDGFQSL WYASVVQGDP LAAMALAGRE TSTVELGTAV
LQTYPVHPLL QAQRIAGAAA VLRRPGLTIG LGPSHQGFVE GIYGLSYTRP GLNTEEYLRI
LMPLLRGEGV DFEGKEWSAH VPAGMVRPAH PVPVLLAALS PRMLRIAGEL ADGAILWMAP
IQAIENHVAP RLLAATEAAG RPAPRIVAGL PVVVHDDEQE ARAAVAAGSA AYATSPAYQR
IMKVGGADGP ADAAIVGDEK SVEAQLHALF DAGATDFHAH IVPAGPDLRA SLKRTRDLLS
SLAG
|
|---|
| |