| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3258 |
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| Symbol | |
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| ID | 5671632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 3858176 |
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| End bp | 3858991 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641242150 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001507570 |
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| Protein GI | 158315062 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAAAGC TCGAAGGCAA GGTCGCTTTC ATCACCGGCG CCGCGCGCGG CCAGGGCCGC
AGCCACGCGA TCCGTCTGGC GCAGGAAGGC GCCGACATCA TCGCGGTGGA CATCTGCGCC
CAGGTGGAGT CGGTGCCTTA CCCGATGGCG ACTCCGGACG ACCTCGAACA CACCGTGAAG
GCGGTCGAAG CGACAGGCAG GCGGATCGTC ACCCGGCAGG TCGACGTCCG CGACGTGTCC
GCGCTACGGC AGGCCTTCGA GGAGGGCACC GCTGAGCTGG GCCCGGTCGA CATCGTTCTG
GCGAACGCCG GCATCGGCCC GGGCGGGGCG GCGGCCGACG AGCAGCAGTG GGATGACGTC
ATCAGCGTCA ACCTCACCGG CGTGTGGAAC ACCGGCCGCG TGGCGATCCC GTCGATGATC
GAACGGGGCC AGGGCGGGGC GATCGTGCTG ACCAGCTCCG CGGGCGGCCT GATCGGCGTG
GGCATCGCCG CCTCGGGGTT CCTGGGATAC ACCGCGGCCA AGCACGGCGT CGTCGGGCTG
ATGCGGTCGT GGGCCAACTA CCTGGCGCCG CACAACATCC GGGTGAACAG CATCGCCCCG
ACCACGGTGC GCACACCCAT GGCCAACAAC GGGGACGTGG CCAGCATCAT CGCACACGCG
CCGGAGCTCG CCCGCGGGCT GACCAACGCG CTGCCCGTCG AGGCGGTGGA CCCGGTCGAC
ATCTCGAACG CCATTCTCTA CCTGGTGTCG GATGACGGCC GCTACGTGAC CGGCACGGTG
CTCCCCGTCG ATGCCGGCCA GGTGAACCTG CGGTAG
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| Protein sequence | MGKLEGKVAF ITGAARGQGR SHAIRLAQEG ADIIAVDICA QVESVPYPMA TPDDLEHTVK
AVEATGRRIV TRQVDVRDVS ALRQAFEEGT AELGPVDIVL ANAGIGPGGA AADEQQWDDV
ISVNLTGVWN TGRVAIPSMI ERGQGGAIVL TSSAGGLIGV GIAASGFLGY TAAKHGVVGL
MRSWANYLAP HNIRVNSIAP TTVRTPMANN GDVASIIAHA PELARGLTNA LPVEAVDPVD
ISNAILYLVS DDGRYVTGTV LPVDAGQVNL R
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