| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3252 |
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| Symbol | |
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| ID | 5671626 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 3848207 |
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| End bp | 3849940 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641242144 |
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| Product | ABC transporter related |
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| Protein accession | YP_001507564 |
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| Protein GI | 158315056 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.516071 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGATCC GTCTGCTGGC GCCCCATGTC CGCCCGTACC GCCGGGCGCT GGCCCTGGTG
ACCGTCCTCC AGCTGTTCCA GACCGCGGCC GCCCTCTATC TCCCGGACCT CAGCGCCGAC
GTCATCGACA AGGGCGTGCT GACCGGCGAC ACCGGCTACA TCTGGCAGGT CGGCGGCGTC
ATGGTGGCGG TGTCGCTCGT CCAGCTGGTG TGCGCGATCG GGGCCGCCGT GGCGGCGACG
CGGGCGGCGA CGTTCCTGGC TCGTGACCTG CGTGCCGCGC TGTTCAGCCA GGTGCAGTCC
TTCTCGGCGC GGGAGCTGCA CCACTTCGGC GCGCCGTCGC TGGTCGTGCG GACCACGAAC
GACATCCAGC AGGTACAGAT GCTGGTGCAG ATCACTCTCA CGTTCATGGT CACCGCCCCG
ATCATGTGCG TCGGCGGGAT CGTCTTCGCC CTCGGCCAGG ACGTCGGGCT GTCGCTGCTG
CTCGTGGTGA CCACCCCGGT GCTGGGTACG GCCGTGGTCG CGATCCTGCG CCGGCTGACG
CCGCTGTCTG TCATCATGCA GGACAGCCTG GACTCGGTGA ACCGGATCAT GCGGGAGCAG
ATCACCGGCG TGCGCGTCAT TCGGGCCTTC GTCCAGGAGG ACCGGGAGCA CGAACGGTTC
GAGGCCGCGA ACGCCCGGCT CACCGAGGCG TCGATCAGCG CGGGCCGGCT CATGGCACTG
ATCTTCCCGC TGGTCACCAC CGTGACCGGC CTGGCAGGCG TCGCCGTCGT GTGGTTCGGC
GCGGGGCGCA TCGAGGCGGG CGCCATCGAG GTCGGTTCGC TGTCCGCTTT CCTGGGCTAC
GTCATGCAGG TCCTCGGAGC CGCGATCATG GCGACCTACC TGCTGCGGAT GCTGCCCCGC
GCCGAGGTGT CCGCCGGGCG GCTCATCGAG GTCCTCGACA CCGACAGCTC CGTCGTCCCG
CCGGTTCGGG CGGTGCCGAT GCTCAGCCGC GCACCCCGCG TCGAGCTGCG CGAGGTGGGA
TTGCGCTACC CGGGCGCCGA GGCCGCCGTG CTGCGCGGCG TCAGCCTCAC GGCCGCCGGC
GGTGAGACGG TCGCCGTCAT CGGCAGTACG GGCAGCGGCA AGAGCAGCCT GCTCAGCCTC
ATCCCCCGGC TGGCCGACGC CACCGAGGGC GCGGTGCTCG TCGGCGGGCG GGACGTCCGC
GACCTGGACC GGGCCACACT GAGCCGGGCG ATCGGCTACG TCCCGCAGCG CCCGTACCTG
TTCTCCGGAA CGGTGGCGAC GAACCTGCGC TACGGGGACC CGGCGGCGAC GGAGGACGAG
GTGTGGCGGG CGCTGGAGAT CGCCCAGGCG CGCGACTTCG TCGAGTCCCT CCCGGAGGGC
CTCGACGCAC CCGTCGCGCA GGGCGGCACG AACTTCTCGG GCGGACAGCG CCAACGGCTC
GCGATCGCCC GTGCTCTCGT CGGCCGGCCC GGCATCTACC TCTTCGACGA CTCGTTCTCG
GCCCTCGACC ACGCCACCGA CGCCCGACTG CGCGCGGCAC TGGCCAGGGA GACGACCGGG
TCGGCCGTCG TCGTCGTCGC GCAGCGGGTG AACACCATCC GCGCCGCGGA CCGGATCGTC
GTCCTGGACG AGGGACGGGT GGTCGGCACC GGCAGCCATC AGGAACTGCT CGCCGGCAAC
GCGACCTACC GCGAGATCGT GCTGTCGCAG ATGACCGAGG CGGAGGCCGC GTGA
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| Protein sequence | MLIRLLAPHV RPYRRALALV TVLQLFQTAA ALYLPDLSAD VIDKGVLTGD TGYIWQVGGV
MVAVSLVQLV CAIGAAVAAT RAATFLARDL RAALFSQVQS FSARELHHFG APSLVVRTTN
DIQQVQMLVQ ITLTFMVTAP IMCVGGIVFA LGQDVGLSLL LVVTTPVLGT AVVAILRRLT
PLSVIMQDSL DSVNRIMREQ ITGVRVIRAF VQEDREHERF EAANARLTEA SISAGRLMAL
IFPLVTTVTG LAGVAVVWFG AGRIEAGAIE VGSLSAFLGY VMQVLGAAIM ATYLLRMLPR
AEVSAGRLIE VLDTDSSVVP PVRAVPMLSR APRVELREVG LRYPGAEAAV LRGVSLTAAG
GETVAVIGST GSGKSSLLSL IPRLADATEG AVLVGGRDVR DLDRATLSRA IGYVPQRPYL
FSGTVATNLR YGDPAATEDE VWRALEIAQA RDFVESLPEG LDAPVAQGGT NFSGGQRQRL
AIARALVGRP GIYLFDDSFS ALDHATDARL RAALARETTG SAVVVVAQRV NTIRAADRIV
VLDEGRVVGT GSHQELLAGN ATYREIVLSQ MTEAEAA
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