| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3238 |
|---|
| Symbol | |
|---|
| ID | 5671613 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 3827050 |
|---|
| End bp | 3827964 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641242131 |
|---|
| Product | luciferase family protein |
|---|
| Protein accession | YP_001507551 |
|---|
| Protein GI | 158315043 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
|---|
| TIGRFAM ID | [TIGR03564] F420-dependent oxidoreductase, MSMEG_4879 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0148661 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTATCG GCCTGACGGG CGGCGGCTCG ACGCCAGACA AGATCGTCGA ACAGGCACGG
CGGGCCGAGG CCGACGGATT CCACTCCCTG TGGTACGCGA GCCTCGTGCA GGGCGACCCG
CTGGTCGCCA TGGCGCTCGC CGGCCGGGAG ACCTCGACGA TCGAGCTCGG TACCGCGGTG
CTGCAGACCT ACCCGTGCCA CCCGCTGCTA CAGGCGCAGC GAGCCGCCTC CGTGGTCGCG
GCGATGGGCC GGCCGGGTCT CACTCTCGGG CTGGGCCCGT CGAACGAGGC CAACATCCGC
GGCAAGTACG GCCTGTCCTT CGATCATCCG GGCCGCAGCA GCGAGGAGTA CCTGCGCATC
CTCACCGGCC TGCTGCGGGG CGAAGCCGTC GACCTCACGG GTCAGGACTG GACCACACGT
GTCCCGGCCG GGACCGTCCG GGCCGCGCAC CCGGTCCCGG TACTGCTGGC GGCGCTGTCG
CCGCGGATGC TGCGGGTGGC GGGAGAACGC GCGGACGGCG CGATCCTGTG GATGGCCTCG
GCGGCGGCGG TCGAACGCCA CGTCGAGCCC CGCATCGCCG CGGCGGCGAA GGCCGCTGGC
CGGCCGGCGC CGCGTATCGT CGCGGGTCTG CCGGTCGTGG TGCACGACGA CGAGCAGGAG
GCCCGGGCAG CCGTCGCCGC GGGTTCCGTC ATGTACGCGA ACTCGCCGGC CTACCAGCGC
ATCATGGCGA TCGGTGGTGT CGACAGCCCC GCCGACGCCG CGATCGTCGG CGACGAAGCA
TCGGTCCGGA CACAGCTGAG CGCGCTGCTC GACGCCGGCG CGACCGATAT CCACGCGCAC
ATCGTCCCGG CCGGTGAGGA CCTCCGCGGA TCGCTGAGAC GCACCCGGGA CCTGCTTCGC
GAGCTGGCCC ACTGA
|
|---|
| Protein sequence | MRIGLTGGGS TPDKIVEQAR RAEADGFHSL WYASLVQGDP LVAMALAGRE TSTIELGTAV
LQTYPCHPLL QAQRAASVVA AMGRPGLTLG LGPSNEANIR GKYGLSFDHP GRSSEEYLRI
LTGLLRGEAV DLTGQDWTTR VPAGTVRAAH PVPVLLAALS PRMLRVAGER ADGAILWMAS
AAAVERHVEP RIAAAAKAAG RPAPRIVAGL PVVVHDDEQE ARAAVAAGSV MYANSPAYQR
IMAIGGVDSP ADAAIVGDEA SVRTQLSALL DAGATDIHAH IVPAGEDLRG SLRRTRDLLR
ELAH
|
|---|
| |