Gene Franean1_3234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3234 
Symbol 
ID5671609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3822255 
End bp3823049 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content74% 
IMG OID641242127 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001507547 
Protein GI158315039 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACA CGGAGATCCT CGGGGTCGAG CAGTCGGGCC CGGTGCGGGT GCTGACGATG 
AACCGGCCGC ACCGCCGCAA CGCCCTCGAC GCCGCGCTGG TCGACGCCCT CGACCAGGCG
CTGAGCGGGG CCGAAGCCGA CCCGGGCACA CACGCGATCG TGCTGCGCGG CGCGGGCAGG
AGCTTCTGCG CCGGCGCTGA CCTGCACTTC CTGCTGGAGC TCAGCGACAG CGGCAGCACG
CCCACGGCCT TCCTGCGGAC CGTGTCCGCG TTGGCCACCC GGCTGGAGAC CAGCTCGTTG
CCGATCGTGG CCGGCCTGCA CGGCCACGCC GTGGCGGGCG GCATCGAGCT CGCGCTCGCC
TGCGACCTGG TGGTCGCCGC CGCCGGCACG CTGATCGGCG ACGGGCACAT CCTCAACAAC
CTGCTGCCCG CCGGAGGCGC CGCGGTGCGG ATGCCGCAAG TACTGGGTCA GCCGACCGCA
CGCCGGCTCG CGCTGACCGG CGAACTCCTG CGCGCCGACC GGCTGGCCGC CACCGGCTGG
CCGCACGAGG TCGTCGCCGA CGACGAGGTC GACACCGCCG CGATGCGGAT CGCCACAACC
CTGGCCCGGG CACACGGTCC GGCCCAGATC GGCTACAAGC GGCTGTTGGC CAGGACGCCC
ACCATGCCCG CCAGTGCCGC GCTGGCCCTC GAACTGACGG CCTTCGACGA GCACTGGGCC
GCGCACGACG TCGCCGCCGC GCTGCGCGCG TTCGTCAACC GCCCCGCCAG CACACGAACG
GAGCAGCCGG CGTGA
 
Protein sequence
MNDTEILGVE QSGPVRVLTM NRPHRRNALD AALVDALDQA LSGAEADPGT HAIVLRGAGR 
SFCAGADLHF LLELSDSGST PTAFLRTVSA LATRLETSSL PIVAGLHGHA VAGGIELALA
CDLVVAAAGT LIGDGHILNN LLPAGGAAVR MPQVLGQPTA RRLALTGELL RADRLAATGW
PHEVVADDEV DTAAMRIATT LARAHGPAQI GYKRLLARTP TMPASAALAL ELTAFDEHWA
AHDVAAALRA FVNRPASTRT EQPA