Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_3230 |
Symbol | |
ID | 5671605 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 3817472 |
End bp | 3818683 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641242123 |
Product | putative Leu/Ile/Val-binding lipoprotein transmembrane |
Protein accession | YP_001507543 |
Protein GI | 158315035 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGTTCGC ATTTATCGCT GATCTTATCG GGAATGACGG TCGTGGTCGC GGCGGCCACG TTAGGTGCCT GCTCCGGCGC GGAGGGCCAG GCCGCCGTGG GTGGGGCCTG TGTCGGTCCG GGTGTGTCCG CCGGTGAGGT GCGGATCGGT CTGGTGTACT CCGATTCGGG TGCCGGGCAT GAGGCGTTCT CGGCGGCGCG GGCGGGTGTG GAGGGGCGGC TCGGTCTGGC GAACGAGGCG GGTGGTGTCC ACGGGCGTCA GGTCCGCTAC GAATGGCGTG ACGACGAGGC GTCGCCGTCG ACGAACGCCG AGGTGGCCAA GGATCTGGTT CGTGACGGGT CGGTGTTCGG GCTGCTGATG ATCACGACGT CGAGTAGTGG CTCGATCGAC GAGCTGGGGT CGCAGGGTGT CCCGGTCGTG GGGCTGGCGG ATCCCACCTG GGCCGAGCAC CCGAACATGT TCTCGCACAA CTACGGGACC TCACCGCAGA CCGTCGGCCG GTACATCCAG GCCGCGGGCG GAACGAAGGT CGCGATCGTC ACCACAGGCA ACGCGGCGTA CACGATGACC TACGCCGGGC AGTACGCGGC CGGCATCGAA TCGGCGGGGC TCGCCACGGT CGCGACGATT CCCTATTCCA GCGGCGGTGA CAGTCAGATC CGAATCGCCC AGCAGATCGC CGCGAGCGGC GCCGACGCGC TGATCGGCCT GACCACCCCC GACGACTTCG CCCGGGTCAT GGACGGCGTG CGCACAGCGC GGCTCAACCT CAAGGCCAGC GTCTCGCTCG CCGGCTATGA CCGCGCGAAC CTCGCCACGT TGGGCCCGGC GCTGGCCGGT GTGTCGTTCC CGGTCTACTT CCGCCCCTTC GAGGCCGGTG GTGCCGCGAT CGAGCGCTAC CAGGCGGCCA TGGTGAAGTT CGCCCCCGAG GTCGTCCTCC CCGAACAGCA GTTCTCCATG TACGCCTACA TCGACACCGA TCTGCTGCTG CGTGGACTCG AACTCGCCGG CCCCTGCCCC ACCCGGCAGG GCTTCATCGA GGCTCTCCGC AAGGTGACCG ACTACGACGC CGGCGGTCTG ATCGAGCCCG TCAACCTCGC CACCAACCCC CATCAGCTCC TCGAATGCAA CGCCTTCGTG CAGATCGACC AGACCGGCTC GGCGTTCCAG GTCACCCGGG AACGCCTCTG CGCCAACAGC ACGGGGAGCT AG
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Protein sequence | MRSHLSLILS GMTVVVAAAT LGACSGAEGQ AAVGGACVGP GVSAGEVRIG LVYSDSGAGH EAFSAARAGV EGRLGLANEA GGVHGRQVRY EWRDDEASPS TNAEVAKDLV RDGSVFGLLM ITTSSSGSID ELGSQGVPVV GLADPTWAEH PNMFSHNYGT SPQTVGRYIQ AAGGTKVAIV TTGNAAYTMT YAGQYAAGIE SAGLATVATI PYSSGGDSQI RIAQQIAASG ADALIGLTTP DDFARVMDGV RTARLNLKAS VSLAGYDRAN LATLGPALAG VSFPVYFRPF EAGGAAIERY QAAMVKFAPE VVLPEQQFSM YAYIDTDLLL RGLELAGPCP TRQGFIEALR KVTDYDAGGL IEPVNLATNP HQLLECNAFV QIDQTGSAFQ VTRERLCANS TGS
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