Gene Franean1_3217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3217 
Symbol 
ID5671593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3796912 
End bp3797535 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content72% 
IMG OID641242111 
ProductTetR family transcriptional regulator 
Protein accessionYP_001507531 
Protein GI158315023 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGC GGCCAACCAC CGGCGGGCAC CCTCCCATGC GGCGCGCGGA CGCGGAGCAG 
AACCGGGCAC GCATCCTCGA CGCCGCCCGC GCCGCGTTCG AAGAGTCCGA GGACGCGTCG
ATGCACACGA TCGCCCGACT GGCCGGCGTC GGACAGGGCA CTTTGTACCG TCACTTTCCC
ACCCGGGAGG CGCTCGTCCT GGCTGTTCAC CGGCGCCGCG TCCAGACGCT GATCGACGCG
CCCGCACAGC TGGCGGCGAC GCATCCGCCG CTGGTCGCTC TCCGCAGATG GCTCGACATC
CTGGCTGCCT GCGGGCAGAA CTTCGCCGGC CTCGGACAGG CCCTGCTCGC CTCCTCCGCC
GCGCAACTGT GCGCGGAGGG CTATCAACCG GTCGTGGACG CCTCCGACCT CATGCTGCGG
ACGGGGCAGG CCGCGGGGCA GATCCGTGCC GATGTCGACG CCGAGGACCT GCTGCTGCTC
GTCAGCTTCC TCTGGCGCGC TGACCGCGGC GACGAGGACG CCGCCCGCTC CAGCCACCTG
CTCGACATCG TTGTCGACGC CGTCCGGTCG GGGCCGCAGG TGTCGCCGAC CGGTCCCACA
ACTCTGCACC GGGACCGGCC ATGA
 
Protein sequence
MTERPTTGGH PPMRRADAEQ NRARILDAAR AAFEESEDAS MHTIARLAGV GQGTLYRHFP 
TREALVLAVH RRRVQTLIDA PAQLAATHPP LVALRRWLDI LAACGQNFAG LGQALLASSA
AQLCAEGYQP VVDASDLMLR TGQAAGQIRA DVDAEDLLLL VSFLWRADRG DEDAARSSHL
LDIVVDAVRS GPQVSPTGPT TLHRDRP