| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3215 |
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| Symbol | |
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| ID | 5671591 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 3794146 |
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| End bp | 3794919 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641242109 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001507529 |
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| Protein GI | 158315021 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCGT TTCCGGCGTG GGAGGAATCC CGGACCGCCA TCGTCACCGG CGGTGGCTCG
GGCATCGGGC TGGCGATCAG CAGGCGGCTG GCGGCCGAAG GCGCATCGGT AGCCGTGTGG
GACCTCGACG GCGCCACGGC AAAGGCGGCG GCAGTCGCGA TCGAGGAAGC AGGTGGGCGG
GCGGTCGCTC TCACGGTCGA TGTCGCGGAT CGGTCACGGA TCGAGGAGGC GGTCTCCGAG
GTGCGCACGC TGTTGGGCCC CGCGACGATC CTCGTGAACA ACGCAGGCAT CTCGCCGTTC
GAGCGCTTCC TGAAAATCAG CAGGGAGTCC TACGATCGGG TGTTCGCGGT GAACATGCGC
GGCACGTTCG ACTGCTGTCA GGCGGTCGTC CCGGACATGG TGGAGGCCGG CTGGGGGCGC
ATCGTGAACA TCGCTTCCTC CGCCGGCCAG ACCGGTAATG CACTGCAGTC GCACTACGCA
GCCACCAAGG CCGGGGTCAT CGGACTCACC CGATCGCTGG CGAAGGAGCT CGGGCCCAAG
GGCATAACCG TCAACGCCAT CCCGCCGAGC TTCATCGACA CACCCACGCT GCGCAGCAGC
AGCGAAGCCG GCTTCCTGGG CGACGGCGTC GACATCCACG TACGGACGAC GCCGGTACGA
CGGGTGGGCC GGGCGGAGGA CATCGCCGCG GCGTGCGCCT ACCTGGTACG CGACGAGACG
AGCTTCGTCA CCGGCCAGGT TCTCGGCGTC AACGGGGGCC GGACGATCGG CTGA
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| Protein sequence | MNPFPAWEES RTAIVTGGGS GIGLAISRRL AAEGASVAVW DLDGATAKAA AVAIEEAGGR
AVALTVDVAD RSRIEEAVSE VRTLLGPATI LVNNAGISPF ERFLKISRES YDRVFAVNMR
GTFDCCQAVV PDMVEAGWGR IVNIASSAGQ TGNALQSHYA ATKAGVIGLT RSLAKELGPK
GITVNAIPPS FIDTPTLRSS SEAGFLGDGV DIHVRTTPVR RVGRAEDIAA ACAYLVRDET
SFVTGQVLGV NGGRTIG
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