| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3205 |
|---|
| Symbol | |
|---|
| ID | 5671581 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 3783082 |
|---|
| End bp | 3784266 |
|---|
| Gene Length | 1185 bp |
|---|
| Protein Length | 394 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641242099 |
|---|
| Product | FMN-dependent alpha-hydroxy acid dehydrogenase |
|---|
| Protein accession | YP_001507519 |
|---|
| Protein GI | 158315011 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.901483 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAGCA CATGGTTCGA GTCGGTCGCC GAGGCACAGC GGCGGGCGCG GCGCAGGCTG
CCGAAGTCGG TGTACAGCGC GCTGCTGGCC GGTTCGGAGG CGGGCGTGTC GTACCGGGAC
AACACCGCGG CGTTCGACGA GCTCGGTTTC GCCCCGCACG TGGCGGGGCT GTCCCCCAAG
CGTGACCAGC AGACCACGGT CCTGGGCCAG CCGATCTCCC TACCGGTGAT CATCTCCCCG
ACCGGGGTGC AGGCGGTGCA CCCCGACGGC GAGGTGGCGG TGGCGCGGGC CGCCGCTGCG
CGCGGCACCG CCATGGGCCT GTCCTCGTTC GCCAGCAAGC CGATCGAACA GGTCATCGCC
GCCAACCCGC AGACGTTCTA CCAGACCTAC TGGATGGGCA CCCGGGACTG GATGATCCGG
CGGCTGGAAC ACGCCCACCG GGCCGGGGCG GTCGGCCTGA TCGTCACCCT GGACTGGTCG
TTCTCGCACA GCCGCGACTG GGGCAGCCCG TGGATCCCCG AACGGCTCGA CCTGAAGACC
ATGGTCAAGC TGGCGCCCCA GGGCGTGACC CGGCCCGCGT GGCTGCTCCA GTACCTGCGC
ACCGGCAAGC TGCCCGACCT GAGCGTGCCG AACCTGGCCG AACCCGGCCA GGAGGCCCCG
GTGTTCTTCG GCGCGTACGG CGAGTGGATG CAGACACCCC CGCCGAGCTG GGAGGACATC
GCCTGGCTGC GCCAGCAGTG GGACGGGCCG TTCCTGCTCA AGGGTGTCTC CCGGGTGGAC
GACGCCCGCC GCGCCCGCGA CGCCGGGGTC AGCGCGATCT CGGTCTCCAA CCACGGCGGC
AACAACCTCG ACAGCACTCC GGCCCCGATC CGGGCCCTGG CCGCGGTCGT GGACGCGGTC
GGTACCGACG TCGAGGTGCT CATGGACGGC GGCATCCGCC GGGGCGGGGA CGTCGTGAAG
GCACTCGCGC TCGGCGCGCG GGCGGTCATG ATCGGCCGCG CCTACCTGTG GGGCCTGGCC
GCCGGCGGGC AGGCCGGGGT CGAGAACGTC CTGGACGTCC TGCGCAACGG GATCGACTCC
GCCCTGCTGT CCCTGGGGCA CTCCTCCATC CACGAACTGA CCCCGGACGA CGTCCTGGTA
CCCGACGGCT TCCCCCGCGC GCTCGGCGCG GCGCCCGCGC GATGA
|
|---|
| Protein sequence | MASTWFESVA EAQRRARRRL PKSVYSALLA GSEAGVSYRD NTAAFDELGF APHVAGLSPK
RDQQTTVLGQ PISLPVIISP TGVQAVHPDG EVAVARAAAA RGTAMGLSSF ASKPIEQVIA
ANPQTFYQTY WMGTRDWMIR RLEHAHRAGA VGLIVTLDWS FSHSRDWGSP WIPERLDLKT
MVKLAPQGVT RPAWLLQYLR TGKLPDLSVP NLAEPGQEAP VFFGAYGEWM QTPPPSWEDI
AWLRQQWDGP FLLKGVSRVD DARRARDAGV SAISVSNHGG NNLDSTPAPI RALAAVVDAV
GTDVEVLMDG GIRRGGDVVK ALALGARAVM IGRAYLWGLA AGGQAGVENV LDVLRNGIDS
ALLSLGHSSI HELTPDDVLV PDGFPRALGA APAR
|
|---|
| |