| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3195 |
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| Symbol | |
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| ID | 5671571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 3772552 |
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| End bp | 3774324 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641242089 |
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| Product | beta-D-glucuronidase |
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| Protein accession | YP_001507509 |
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| Protein GI | 158315001 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.167785 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTCGTC CCCAGGACGG TTCGACACGG GAGCGGCGAT CTCTGGGCGG GCTGTGGGCC
TTCCGTCTCG ACCCCGCGGG TACCGGGCGG AACGCGGGCT GGTGGCGTGC GCGCCTGCCC
GGGGCCCGGG AGATGCCGGT GCCGGCCAGC TACAACGACA TCGTGCCCGA TCTCGCCGTG
CGTGATCATG TTGGTGACGC CTGGTACCAG ACGGTCGTCC GCATCCCGGC CGGCTGGTCC
GCGCGGCGGG TGGTGCTGCG TTTCGACGCC GCGACCCACC GTGCGGTCGT CTGGGTGAAC
GACACGCTCG TCGCCGAGCA CGAGGGTGGC TACACGCCGT TCGAAGCCGA CATCACCGGG
GTCGTGGCGC CCGGGGACGA GGCCCGGGTC ACCGTGGTCG TCAACAACGA GCTCACGTTG
ACCTCGATAC CGCCCGGCAT CGTGGAGGAC ACCGCGCAGG GACGCCGCCA GAAGTACTTC
CACGACTTCT TCAACTACGC GGGTCTGCAC CGCTCGGTCT GGCTGTACAC CACACCGCAC
ACGCGGATCA GCGACATCGC GGTGGAGACC GCTCTCGACG GCGCCGCGGG CACGGTGCGC
TACGCGGTGG AGATCGAGGG TGCCCAGGGT GTTGCCGCCA TCCGGGTCGT GCTCCGCGAC
GCGCAGGGGC GGGAGGTCGC CGCCGCCGAC GGTGCCGTGG GAATGTTGAA CGTGCCAGCC
GTGCATCCAT GGGCACCGGG TGACGGTTAC CTGTACGAGC TCGATGCCCG TCTGGTCGGT
GCGGGCGGGG AGGTGGCCGA CAGTTATGTC CTGCCGGTCG GTGTGCGTAC CGTCGAGGTA
CGCGGCACCC AGTTTCTGAT CAACGGGGAG CCTTTCTACT TCCGGGGCTT CGGTAAGCAC
GAGGACGCGC CGGTGCGCGG CAAGGCCCAT GACGACGCGC TCATGGTCCA TGATTTCGAG
CTGATGGAGT GGATCGGCGC CAACTCCTTC CGCACCTCCC ACTATCCGTA TGCGGAGGAG
GTACTGGAGT ACGCCGACCG GAGTGGCATC GTCGTGATCG ACGAGACCGC GGCCGTCGGT
CTGAACCTGA AGGCCTCGCT CGCTTTCGGC AGCAGGCCGA CGGTGAGTAC CTTCGGTGAG
GATGGCATCA GCTCCGTCAC CCAGCGCGCG CATCTCCAGG CCGTGCGGGA ACTGATAATC
CGGGACCGGA ACCATCCGAG TGTGGTGTTG TGGAGCCTCG CCAACGAGCC GGATTCCAGT
ACCGCCGCCG CCCGGGAGTA CTTCGCGCCG CTGTTCGCCG AGGCCCGCAA GCTCGACCCG
ACCTGCCCGG TGGGCTTCGT CAACTCGTTC GACCAGTGCC AGGTCACCGA GCTCGCCGAC
GTCGTCATGA TCAACCGTTA CTACGGCTGG TACATCAACA ACGGGGAGCT CAAGGCCGCC
GAGGTCGCAC TGGAGGCCGA GCTGAACAGG TGGGCCGCCC ACGGCAAGCC GGTGATCGTC
ACCGAGTACG GAGCGGACAC CATGGCCGGG CTGCACGCCG TGGTCGACAC CCCCTGGTCC
GAGGAGTACC AGGTGCGGTT CCTCGAGATG CACCACCGGG TGTTCGACCG GGTGGATGCC
GTGATCGGCG AGCACATCTG GAACTTCGCC GACTTCGCCA CCAGCCCGCA CATCATCCGG
GTCGACGGCA ACAAGAAGGG CGTGTTCACC CGGGACCGGC ACCCCAAGAG CGCCGCGTTC
TCCGTCCGCC GGCGCTGGCG CCCGCAGGCC TGA
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| Protein sequence | MLRPQDGSTR ERRSLGGLWA FRLDPAGTGR NAGWWRARLP GAREMPVPAS YNDIVPDLAV
RDHVGDAWYQ TVVRIPAGWS ARRVVLRFDA ATHRAVVWVN DTLVAEHEGG YTPFEADITG
VVAPGDEARV TVVVNNELTL TSIPPGIVED TAQGRRQKYF HDFFNYAGLH RSVWLYTTPH
TRISDIAVET ALDGAAGTVR YAVEIEGAQG VAAIRVVLRD AQGREVAAAD GAVGMLNVPA
VHPWAPGDGY LYELDARLVG AGGEVADSYV LPVGVRTVEV RGTQFLINGE PFYFRGFGKH
EDAPVRGKAH DDALMVHDFE LMEWIGANSF RTSHYPYAEE VLEYADRSGI VVIDETAAVG
LNLKASLAFG SRPTVSTFGE DGISSVTQRA HLQAVRELII RDRNHPSVVL WSLANEPDSS
TAAAREYFAP LFAEARKLDP TCPVGFVNSF DQCQVTELAD VVMINRYYGW YINNGELKAA
EVALEAELNR WAAHGKPVIV TEYGADTMAG LHAVVDTPWS EEYQVRFLEM HHRVFDRVDA
VIGEHIWNFA DFATSPHIIR VDGNKKGVFT RDRHPKSAAF SVRRRWRPQA
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