Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_3195 |
Symbol | |
ID | 5671571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 3772552 |
End bp | 3774324 |
Gene Length | 1773 bp |
Protein Length | 590 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641242089 |
Product | beta-D-glucuronidase |
Protein accession | YP_001507509 |
Protein GI | 158315001 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.167785 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTCGTC CCCAGGACGG TTCGACACGG GAGCGGCGAT CTCTGGGCGG GCTGTGGGCC TTCCGTCTCG ACCCCGCGGG TACCGGGCGG AACGCGGGCT GGTGGCGTGC GCGCCTGCCC GGGGCCCGGG AGATGCCGGT GCCGGCCAGC TACAACGACA TCGTGCCCGA TCTCGCCGTG CGTGATCATG TTGGTGACGC CTGGTACCAG ACGGTCGTCC GCATCCCGGC CGGCTGGTCC GCGCGGCGGG TGGTGCTGCG TTTCGACGCC GCGACCCACC GTGCGGTCGT CTGGGTGAAC GACACGCTCG TCGCCGAGCA CGAGGGTGGC TACACGCCGT TCGAAGCCGA CATCACCGGG GTCGTGGCGC CCGGGGACGA GGCCCGGGTC ACCGTGGTCG TCAACAACGA GCTCACGTTG ACCTCGATAC CGCCCGGCAT CGTGGAGGAC ACCGCGCAGG GACGCCGCCA GAAGTACTTC CACGACTTCT TCAACTACGC GGGTCTGCAC CGCTCGGTCT GGCTGTACAC CACACCGCAC ACGCGGATCA GCGACATCGC GGTGGAGACC GCTCTCGACG GCGCCGCGGG CACGGTGCGC TACGCGGTGG AGATCGAGGG TGCCCAGGGT GTTGCCGCCA TCCGGGTCGT GCTCCGCGAC GCGCAGGGGC GGGAGGTCGC CGCCGCCGAC GGTGCCGTGG GAATGTTGAA CGTGCCAGCC GTGCATCCAT GGGCACCGGG TGACGGTTAC CTGTACGAGC TCGATGCCCG TCTGGTCGGT GCGGGCGGGG AGGTGGCCGA CAGTTATGTC CTGCCGGTCG GTGTGCGTAC CGTCGAGGTA CGCGGCACCC AGTTTCTGAT CAACGGGGAG CCTTTCTACT TCCGGGGCTT CGGTAAGCAC GAGGACGCGC CGGTGCGCGG CAAGGCCCAT GACGACGCGC TCATGGTCCA TGATTTCGAG CTGATGGAGT GGATCGGCGC CAACTCCTTC CGCACCTCCC ACTATCCGTA TGCGGAGGAG GTACTGGAGT ACGCCGACCG GAGTGGCATC GTCGTGATCG ACGAGACCGC GGCCGTCGGT CTGAACCTGA AGGCCTCGCT CGCTTTCGGC AGCAGGCCGA CGGTGAGTAC CTTCGGTGAG GATGGCATCA GCTCCGTCAC CCAGCGCGCG CATCTCCAGG CCGTGCGGGA ACTGATAATC CGGGACCGGA ACCATCCGAG TGTGGTGTTG TGGAGCCTCG CCAACGAGCC GGATTCCAGT ACCGCCGCCG CCCGGGAGTA CTTCGCGCCG CTGTTCGCCG AGGCCCGCAA GCTCGACCCG ACCTGCCCGG TGGGCTTCGT CAACTCGTTC GACCAGTGCC AGGTCACCGA GCTCGCCGAC GTCGTCATGA TCAACCGTTA CTACGGCTGG TACATCAACA ACGGGGAGCT CAAGGCCGCC GAGGTCGCAC TGGAGGCCGA GCTGAACAGG TGGGCCGCCC ACGGCAAGCC GGTGATCGTC ACCGAGTACG GAGCGGACAC CATGGCCGGG CTGCACGCCG TGGTCGACAC CCCCTGGTCC GAGGAGTACC AGGTGCGGTT CCTCGAGATG CACCACCGGG TGTTCGACCG GGTGGATGCC GTGATCGGCG AGCACATCTG GAACTTCGCC GACTTCGCCA CCAGCCCGCA CATCATCCGG GTCGACGGCA ACAAGAAGGG CGTGTTCACC CGGGACCGGC ACCCCAAGAG CGCCGCGTTC TCCGTCCGCC GGCGCTGGCG CCCGCAGGCC TGA
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Protein sequence | MLRPQDGSTR ERRSLGGLWA FRLDPAGTGR NAGWWRARLP GAREMPVPAS YNDIVPDLAV RDHVGDAWYQ TVVRIPAGWS ARRVVLRFDA ATHRAVVWVN DTLVAEHEGG YTPFEADITG VVAPGDEARV TVVVNNELTL TSIPPGIVED TAQGRRQKYF HDFFNYAGLH RSVWLYTTPH TRISDIAVET ALDGAAGTVR YAVEIEGAQG VAAIRVVLRD AQGREVAAAD GAVGMLNVPA VHPWAPGDGY LYELDARLVG AGGEVADSYV LPVGVRTVEV RGTQFLINGE PFYFRGFGKH EDAPVRGKAH DDALMVHDFE LMEWIGANSF RTSHYPYAEE VLEYADRSGI VVIDETAAVG LNLKASLAFG SRPTVSTFGE DGISSVTQRA HLQAVRELII RDRNHPSVVL WSLANEPDSS TAAAREYFAP LFAEARKLDP TCPVGFVNSF DQCQVTELAD VVMINRYYGW YINNGELKAA EVALEAELNR WAAHGKPVIV TEYGADTMAG LHAVVDTPWS EEYQVRFLEM HHRVFDRVDA VIGEHIWNFA DFATSPHIIR VDGNKKGVFT RDRHPKSAAF SVRRRWRPQA
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