| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3186 |
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| Symbol | |
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| ID | 5671562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 3753177 |
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| End bp | 3754928 |
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| Gene Length | 1752 bp |
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| Protein Length | 583 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641242080 |
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| Product | integrase catalytic region |
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| Protein accession | YP_001507500 |
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| Protein GI | 158314992 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.605604 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCCCC CAGAGCACGA CGATTTGTGG CCGACACCAC AGGCCGACAG CCTGCCCTCC
GGACAGCGGC CAATCCGTCC GGACCCAACC GACCACGACG CCGATTCGGC GGGCGCGACT
GACCGCCCAG TAGCCGGTCC ACATTCCCAT GCCTCAGGCA CCCCAAAACC TCGCCGTCAC
CGCCGGCGAC GAACCATCGC GATCATTCTT CTCGTTCTGC TCGCACTTTT CCCGGTCTTC
GACCGGATCA CGGTCTCAAT GGTCGAGAAG CAGGTCGTCA AACAACTCGA AACCGCCGTC
GCGGACACCC TGGACTGCAA TGCACCCCAA CCAGCCGTCA GGCGTGTCAA CATCGCCGGT
TTCCCGTTCC TCACCCAGGT GCTGCTCGGG AAGCCCAGGG ATGTCAGTCT GTCCATCGAC
GACCTGTCGA CACCCGGCCC CCGGATCTCC TCGCTGGACG CGAACGCCAA AGGCATCAAA
ATTCCGATCT ACAACATGAT CACCGGCGGT GATGGAAAAC TTTCTGTCGA CGAGGTACGG
GCCACGGTCA AGATGAGTTA CACAGACTTG AACGCCTATC TCGCCGGGAA GACGGGCCAC
CTGCAGGTGA AACCGGCAGA CGGCGGACGG AGCCTCAACA TCTCTGGAAC AGTAGACCTA
CCGCTGATCG GCTCCCAGCA GATTGACGGC GTCACCACCT TCCAGGTCCG CGACAATGAG
ATCGAGTTGA CACCATCCCA CCTCACGTTA CGCGGAGCGA TCAACCTCGA CTTTCTGGTC
CCGCTAGGCC AACTAATTCC CTCGATCCCG ATCCCGGTTG GGGAACTACC GTTCGAGGTA
AAGGTGGAGT CAGTGTCCAC CGGCTTGCTG AGCCGGGTGT CCCCGGGGCG GCCACGGGAG
GTCCCGGGGC GGGTACGGGC GCGGATCCTG GCGTTGACCA GGACCACTCC TCCACCGGAG
ACCGGACTGA GCCACTGGAC GAGCACCGAG ATGGCGCGGT ACCTGAAGCG CCGCGAAGGA
GTGTCGGTCT CGCACACCTT CGTGGCCCAG CTGTGGCGGG AGAACGATCT CCAGCCGCAC
CGGCACCGAG TCTTCAAGCT CTCGGCGGAC CCGGATTTCG AGGCCAAGGT GGAGGACGTC
GTCGGCCTCT ACCTTGATCC CCCCGAGGGC GCCGAGGTCC TGTCGATCGA CGAAAAGCCT
GGGGTGCAGG CACGCGACCG GACGCAGCCA CCGCGGCCGG TCGCCTCCGG CCGGGTCGCC
ACCCGCACGC ACGACTACCA GCGGAAGGGC ACGACCGACC TGTTCGCCGC CCTCGACGTC
GGGACGGGGC GGGTCACCGC CAGGTGCTTC CCCAGCCACA CCAGGGCCGA TTTCCTCACG
TTCATGGACC AGGTCATCGC GGAATACGGC GGTGCGGAGC TCCATGTCGT GGTCGACAAT
CTGGCCACCC ACTACGGCCC CGACGTCGAC ACATGGCTAC GCAGACACAA GAACGTCACG
TTCCATTTCA CCCCGTCCGG CGGTTCATGG CTCAACCAGG TCGAGAACTG GTTCGGTATT
CTCACCCGGC ACGCACTCCA GCACGGGGCG TTCGTCTCGG TCCAGGACCT CGTCAACACC
ATCAACAACT ATGTCAAGAA CTGGAACTGG GACGCCCATC CGTTCGAGTG GACAGCCACC
GCAGAAGAGA TCGTAGCCAA GGTGGAGGTA CTCCACCGGG AATTCAGGAA GCTGCTCGCC
AACAACTTGT GA
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| Protein sequence | MSPPEHDDLW PTPQADSLPS GQRPIRPDPT DHDADSAGAT DRPVAGPHSH ASGTPKPRRH
RRRRTIAIIL LVLLALFPVF DRITVSMVEK QVVKQLETAV ADTLDCNAPQ PAVRRVNIAG
FPFLTQVLLG KPRDVSLSID DLSTPGPRIS SLDANAKGIK IPIYNMITGG DGKLSVDEVR
ATVKMSYTDL NAYLAGKTGH LQVKPADGGR SLNISGTVDL PLIGSQQIDG VTTFQVRDNE
IELTPSHLTL RGAINLDFLV PLGQLIPSIP IPVGELPFEV KVESVSTGLL SRVSPGRPRE
VPGRVRARIL ALTRTTPPPE TGLSHWTSTE MARYLKRREG VSVSHTFVAQ LWRENDLQPH
RHRVFKLSAD PDFEAKVEDV VGLYLDPPEG AEVLSIDEKP GVQARDRTQP PRPVASGRVA
TRTHDYQRKG TTDLFAALDV GTGRVTARCF PSHTRADFLT FMDQVIAEYG GAELHVVVDN
LATHYGPDVD TWLRRHKNVT FHFTPSGGSW LNQVENWFGI LTRHALQHGA FVSVQDLVNT
INNYVKNWNW DAHPFEWTAT AEEIVAKVEV LHREFRKLLA NNL
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