| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3159 |
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| Symbol | |
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| ID | 5671536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 3721799 |
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| End bp | 3724198 |
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| Gene Length | 2400 bp |
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| Protein Length | 799 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641242054 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001507474 |
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| Protein GI | 158314966 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTGGGATG AGGTCAGGCT CCCTCATGAC GCGATGGTGG CTCGTGAACG TAACCGTTCC
GACGCCGCGG CGGGCCAGCG CGGCTTCTAC CCGGCTGGGG CGTACCAGTA CAGGAAGTCG
TTCTTCGTGC CGGAGGAGTA CCGGAACCGG CGCGTCACCT TCGAGTTCGA GGGTGTCTAC
CGGAGCGCCA GGGTTTTTCT CAATGGTGGC CTCGCCGGAC AGCATGCCTA CGGCTACTCC
CACTTCTACG TCCGCGCCGA CCATTTCCTG AAGTACAACG AGGACAACGA GATCCTGGTG
GAGGCACACA GCGCCGATGA CACCCGCTGG TACTCGGGTG GTGGCCTGTA CCGCAACACG
AAGCTCATCG TCGGCGATCT CGTGCACATC GGCCTGGACG GGGTGAAGGT CACGACGCCG
GCCATCGACG CGGACCTTGC CCTAGTCGCG GTGGCGACGC AGGTGCACAA CGAGTCCTCG
GTCACCCGGA CCGTCGAGGT GACCACCGAG ATCGTGGGCG CCGACGGTGT CGTCGTGGTC
CGTGACGTCG CCCCGCTCAC CCTGTTCACG GACGATCCGG TCACCGTACG CCAGCGGCTG
CCGGTGCCGC GGCCGCAGCT GTGGGGAGTG GAGCACCCGC ACCTCTACAC CTGCCGGACC
AGAGTGACGG CGGACGGAGA GCTCCTGGAT GAGGAGGCCA CCCGTTTCGG TGTCCGGTCG
CTCACCGTCG ATCCGCACTG GGGTCTGCGC ATCAATGGTG GGGTGGTGAA CCTCCGCGGC
GCGTGCATCC ACCACGACAA CGGCGTGATC GGTGCCGCCA CGATAGACCG GGCCGAACAG
CGCCGGGTCG AGATCCTGAA ACAGGCCGGT TTCAACGCCA TCCGTAGTTC CCACAATCCG
ATCAGCAAGG CCCTCCTCGA CGCCTGCGAC CGGCTCGGCA TGCTCGTAAT CGACGAGTTG
TTCGACGCAT GGACCCGGTC GAAGGTCGCG CAGGACTACG CCCTCGACTT CCCCCTCTGG
TGGAAGTCGG ACGTGCAGGC GATGGTCGAC AAGGACTTCA ACCACCCCTG CGTGATCCTC
TACTCGATCG GGAACGAGAT CCCGGAGACA GGCACCGCTG CCGGCGCGGC GATCAGCCGC
CAGCTCGCCG AGAGGATCCG AGCCATCGAC GACACCCGTT TCGTCACGAA CGGCGTCAAC
GGCCTTCTCG CCGGCGGCCC CGAGCTGCTC GCGTCGTTCT CCAGCGGTGC TCGGGAGAAA
AGCAGCGAGG CGGGCGAGGC GGTGGACGTC AACGCGTTCA TGAACAGGTT CCGCGAGTTT
ATGCCGATCC TCATGGCCTC CGAAATGGTC GGTTCGAAGA CCGCGGAGTC GATGGCCTGC
CTGGACGTCG CCGGCTACAA CTACCTGGAG TCACGGTACG AGCTGGACCG AACACTGTTC
CCGAACCGGG TGATCGTGGG GACCGAGACC TACCCGTCGG AGATCGACAG GAACTGGCGG
CTCGTCCAGG ACAACAGCCA CGTCATCGGT GACTTCACCT GGACCGGCTG GGACTATCTC
GGCGAACCAG GAATCGGGCG GATCGAGTAC CAAGGCGACG AGGAAAACGC CAGCACCTCC
CCATCCCACG GCAGTTATCC GTGGCTGACC GCGTGGTGCG GCGACATCGA CATCACCGGC
CACCGCCGAC CGGCCTCCTA CTACCGCGAG ATCGTGTTCG GCCTACGCAG CGAGCCCTAC
ATAGCCGTGC ACCGCCCCGA CCGCTACGGC CAGCCAGTTA CGGTGGCGAT GTGGTGGTCG
TGGAGTGACG CGATCTCCAG CTGGTCCTGG GACGGCCACG AGACCAGACC GGTGCGGGTG
GAGGTTTACT CGGCCGCCGA CGAGGTCGAA CTTTTGGTCA ACGGCCGGCT GATCGGTACC
GTCCCGGCGG GGGAGAAGAA CCGGTTTAAG GCCGAGTTCG ACACCGTTTA CGAACCCGGC
GAAATCGTCG CTGTCGCCTA CACCGCTGGC CGCGAGACCG GACGCACCCT GCTGCGCTCG
GCGACCGGCG AGGTCCGCCT CGCCGTCGCC GCCGACCGCA CCGACATCGT CGCCGACGAC
ACCGACCTTG CCTACATCGC CATCACCCTC GTCGACGAGG CCGGCAACCT CTACAACACC
GCCGACCGCA CGGTCGCCGT CGAGGTGGCG GGACCCGGCG TGCTGCAGGG CTTCGGTAGC
GCGGACCCGA AAACGGAAGA GAACTTCTTC GATACCACCC GCGCCACCTT CGACGGCCGG
GCACTCGCCG TCATCCGCCC CACCGCCCCC GGCACGATCA CCGTGACCCT CACCGCGCAG
GGATGCGAGC CCTCCACTAT CCGCATCGAA GCCGAACTTA CGGCACGCTC AGGCGAATGA
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| Protein sequence | MWDEVRLPHD AMVARERNRS DAAAGQRGFY PAGAYQYRKS FFVPEEYRNR RVTFEFEGVY
RSARVFLNGG LAGQHAYGYS HFYVRADHFL KYNEDNEILV EAHSADDTRW YSGGGLYRNT
KLIVGDLVHI GLDGVKVTTP AIDADLALVA VATQVHNESS VTRTVEVTTE IVGADGVVVV
RDVAPLTLFT DDPVTVRQRL PVPRPQLWGV EHPHLYTCRT RVTADGELLD EEATRFGVRS
LTVDPHWGLR INGGVVNLRG ACIHHDNGVI GAATIDRAEQ RRVEILKQAG FNAIRSSHNP
ISKALLDACD RLGMLVIDEL FDAWTRSKVA QDYALDFPLW WKSDVQAMVD KDFNHPCVIL
YSIGNEIPET GTAAGAAISR QLAERIRAID DTRFVTNGVN GLLAGGPELL ASFSSGAREK
SSEAGEAVDV NAFMNRFREF MPILMASEMV GSKTAESMAC LDVAGYNYLE SRYELDRTLF
PNRVIVGTET YPSEIDRNWR LVQDNSHVIG DFTWTGWDYL GEPGIGRIEY QGDEENASTS
PSHGSYPWLT AWCGDIDITG HRRPASYYRE IVFGLRSEPY IAVHRPDRYG QPVTVAMWWS
WSDAISSWSW DGHETRPVRV EVYSAADEVE LLVNGRLIGT VPAGEKNRFK AEFDTVYEPG
EIVAVAYTAG RETGRTLLRS ATGEVRLAVA ADRTDIVADD TDLAYIAITL VDEAGNLYNT
ADRTVAVEVA GPGVLQGFGS ADPKTEENFF DTTRATFDGR ALAVIRPTAP GTITVTLTAQ
GCEPSTIRIE AELTARSGE
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