| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3155 |
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| Symbol | |
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| ID | 5671532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 3714848 |
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| End bp | 3717070 |
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| Gene Length | 2223 bp |
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| Protein Length | 740 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641242050 |
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| Product | glycoside hydrolase family 3 protein |
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| Protein accession | YP_001507470 |
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| Protein GI | 158314962 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACCGC GCAACGATCC CGTCGACCTC ACCTTACAGC ACAAGGCATC CCTTCTATCG
GGACACGACT TCTGGTCCAC AAAATCCCTG GACGACGCGG GGATCCCCTC GATAGTTCTC
GCTGACGGTC CGCACGGCGT GCGCCTTCAG CGCGATAGAG CAGACCACGC GGGCATCTAC
GACAGCTTGC CCTCCACCTG CCTGCCTCCG GCGGTCGCGG TCGGGTCCAG CTGGGATGTC
GAGGTGGCGA GCCGAGTGGG TGCCGCAGTC GGGCGGGAGG CCCGCGCTCT GGGGGTCGCG
GTCGTGCTGG GCCCGGGAGT GAACATCAAG CGGTCGCCTC TGTGCGGCCG CAACTTCGAG
TACTACTCCG AGGATCCGCT GCTAACCGGC GTGCTGGCGA CCGCGCACAC ACAGGCGTTG
CAGGCCCAGG GAGTGGGCGC GTCGGTGAAG CACTTCGCGG CCAACAACCA GGAGACCGAC
CGGATGGTCA TCAGCGCCGA CGTCGACGAA CGCACCCTGC GGGAGATCTA CCTTCCCGCC
TTCGAGCGGA TCGTCACCGA AGCGCAGCCC GCGACCGTTA TGGCCGCCTA CAACCGCGTC
AACGGGGTCG CCGCGTCGCA GAACCGGTGG CTTCTGACTG ACATCCTGCG CACCGAGTGG
GGCTTCACAG GGATCGTTGT CTCGGACTGG GGCGGCGTCT ACGACCGGAT CGCCGCCCTC
GCGGCGGGAC TGGACCTCGA GATGCCAGGA TCCTCTGGTG TCAACGACGC GAAGGTCGCG
CAGGCCGTCC GCGACGGGCT CCTGGCCGAG ACCGTCGTCG ACGCGAGCGT ACAGCGCCTG
ATCACGCTTG CCGGTCTCGG TAAGGCCACC GAGGGCGATC TGCCCGCCGA GAGAGATCAC
CACGCCCTCG CCAGGGAGGT GGCCGCCGAC TGTGCCGTCC TACTCAGAAA CGAACACGCG
ACGCTTCCGC TCGACCCAGC CGCTCGCATC GCGGTCATCG GCGAGCTCGC CGTCTCCCCC
AGGTTCCAGG GCGGGGGCAG CTCACGGGTG AACCCGACCC GGATCGACGT CCCGTTGGAG
GCCATCACCG CCCTCGGGCA GAGCGTCGTG TACGCCCGCG GTTTCACCAC CGACGGCTCC
AAAGACGCGC GGGAGCTTCG AGACGACGCC GTCCGCATCG CGCTCGACGC CGACGTCTCC
ATCATTTTCG CCGGAGGAGA TGAAGACTCG GAAGGCATCG ACCGCGAACA CATCAACCTG
CCCGCCGACC AGATCGACCT GATACGAGCA GTCGCCGCCG TGGCCCCGCG GACTGTCGTC
GTCTTGTCCA ACGGAGGCGT GGTCTCGCTC GAGGGTTGGC ACGACGACGT GGACGCGATC
CTGGAGGCCT GGTTTCTCGG ACAGGCAGCC GGCGGCGCGA TCGCCGACCT TCTGTTCGGC
GTGGTCAACC CCTCCGGTCA CCTCGCCGAG ACCATTCCAC GGCAGCTGCA GGACACTCCT
TCCTACCTCA CCTTCCCCGG AGAGCAGGGC CACGTCCGGT ACGGCGAGGG CGTCATGGTC
GGCTATCGCT ACTACGAAAG CGTCCAACGC GCCGCCCGCT ACCCTTTCGG GCACGGTCTG
AGCTACACGA AGTTCGCCAC CAGCGAGCTG CAGGTGACCG TGGACGGTGA CGATTCCGCG
ACCGTCCGCG TCACCGTCAC GAACATCGGC GACCGAGCTG GTAAGCACGT CGTGCAAGTC
TATGTTGCCA CCGACGCGGG ACGGGTTCGC CGCCCGGCAC GGGAGCTGCG CGCGTTCACC
AAGATCGCAC TACAGCCCGG CGAGAGCCGA ACCGTCGAAC TGGCCCTCGA TCGGCGCTCC
TTCGCCTACT ACGACATCAA ACAGGCCCGA TGGACCGTCG CGCCCGGTAG CTACTCGATC
CAGATCGGCG AGAGCGCGAC GCGGATCATC GCCGAGCAGA ACATCACCCT CCCAGGCGAC
ACCGTGACCC AGGAGCTTTC CCTGGACTCA GCCGTCTCCG ACTGGCTCGA CCACCCCATC
GTCGGGCCCA TGTTCCGGCG CACCCTTGAC AAGGCCTCGC CTGACCGACG AAGCCTCCTC
ACCGACCAGG CCTCGAGGGC CATCGAAATG GTCGCGTCGA TGCCCCTGCG CCAAATCATG
CAGTTTCCCA CCGTGGACCT GCCCGTCGAC GCACTCACCC ACATGATGGA GCTGACCCGA
TGA
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| Protein sequence | MTPRNDPVDL TLQHKASLLS GHDFWSTKSL DDAGIPSIVL ADGPHGVRLQ RDRADHAGIY
DSLPSTCLPP AVAVGSSWDV EVASRVGAAV GREARALGVA VVLGPGVNIK RSPLCGRNFE
YYSEDPLLTG VLATAHTQAL QAQGVGASVK HFAANNQETD RMVISADVDE RTLREIYLPA
FERIVTEAQP ATVMAAYNRV NGVAASQNRW LLTDILRTEW GFTGIVVSDW GGVYDRIAAL
AAGLDLEMPG SSGVNDAKVA QAVRDGLLAE TVVDASVQRL ITLAGLGKAT EGDLPAERDH
HALAREVAAD CAVLLRNEHA TLPLDPAARI AVIGELAVSP RFQGGGSSRV NPTRIDVPLE
AITALGQSVV YARGFTTDGS KDARELRDDA VRIALDADVS IIFAGGDEDS EGIDREHINL
PADQIDLIRA VAAVAPRTVV VLSNGGVVSL EGWHDDVDAI LEAWFLGQAA GGAIADLLFG
VVNPSGHLAE TIPRQLQDTP SYLTFPGEQG HVRYGEGVMV GYRYYESVQR AARYPFGHGL
SYTKFATSEL QVTVDGDDSA TVRVTVTNIG DRAGKHVVQV YVATDAGRVR RPARELRAFT
KIALQPGESR TVELALDRRS FAYYDIKQAR WTVAPGSYSI QIGESATRII AEQNITLPGD
TVTQELSLDS AVSDWLDHPI VGPMFRRTLD KASPDRRSLL TDQASRAIEM VASMPLRQIM
QFPTVDLPVD ALTHMMELTR
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