Gene Franean1_3154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3154 
Symbol 
ID5671531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3713485 
End bp3714363 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content65% 
IMG OID641242049 
Productalpha/beta hydrolase domain-containing protein 
Protein accessionYP_001507469 
Protein GI158314961 
COG category[I] Lipid transport and metabolism 
COG ID[COG0657] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAA ACCCGATGGT CAACCGTGCG TTAGAGGATT TCTCCTCCGA GAGCCTGGCG 
CGAGCACGAG GCCCGGTCGG GTTCCCGGTG ACCCGTGAGA TGGCATCCGT GTCCGACGAG
GATGCCGACG GCGTCCCCGT TCGCATCTAC CAGCCCGAGG CGAAGAGAAC CGGCCTGGTC
GTGTACTTCC ACGGTGGTGG ATGGTGCGTG GGCAGCGTCG GTCTCATGGA CAACGTCGCC
AGGGAGCTGG CGCACGCCAC CGGAGCAACA GTCGTGTCCG TCGAGTACCG TCTCGCACCC
GAGCATCCCT ACCCTGCCGG CCTCGACGAC TGCGAACTGG TGACACGCTG GGCGCTGAAG
AACGCGAAGC GTTTCGGCAC CTCCCCCGCC CAGGTGGTGG TCGCCGGCGA GAGCGCCGGA
GGGAATCTTG CCGCCGCGGT GACTCTGCGC CTACGAGGGT CCTCCGCTGT TCCACTCGCC
GGACAGATTC TCATTTACCC CGGTCTGGAC AGCGGCGTCG ACCCACTGCC GTCCCGCGTC
GAGTTCATCA ACGTCATGGG CGGCGCCAGC ATGATGACGT ATTACTGGGA CGCCTATGCT
GCCGGCCGTG ACCTCACCCG CGACCCCTTC GTCGTGCCGC TCCAGGCGGA CAGCCTGGCC
GGCCTTCCAC CGGCACTCAT CCTGCGAGGT GGCTGCGACT TCCTACGGGA CGAGGGTCTG
CGCTACGCCA CACGCCTCAG CGAAGCCGGT GTTCCGGTGG AGGACACTTG CTACCCGGGC
CAGCCTCACG GCTTCGTGAA CTATATGTTC CCGGCCGCCG AGAAACTGTT CCGACAGATT
TCCCAATGGT CGAAGAGGAT TTTCGCGGAG GCGAATTAA
 
Protein sequence
MKKNPMVNRA LEDFSSESLA RARGPVGFPV TREMASVSDE DADGVPVRIY QPEAKRTGLV 
VYFHGGGWCV GSVGLMDNVA RELAHATGAT VVSVEYRLAP EHPYPAGLDD CELVTRWALK
NAKRFGTSPA QVVVAGESAG GNLAAAVTLR LRGSSAVPLA GQILIYPGLD SGVDPLPSRV
EFINVMGGAS MMTYYWDAYA AGRDLTRDPF VVPLQADSLA GLPPALILRG GCDFLRDEGL
RYATRLSEAG VPVEDTCYPG QPHGFVNYMF PAAEKLFRQI SQWSKRIFAE AN