Gene Franean1_3145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3145 
Symbol 
ID5671522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3700685 
End bp3701239 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content61% 
IMG OID641242040 
ProductPadR-like family transcriptional regulator 
Protein accessionYP_001507460 
Protein GI158314952 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGGT CGACTCCGAG CCAGGGTCCA CGGCTCAGCC CCACGTCATA CCTGGTTCTC 
GGCCTGATCA GCCTGCGTGG GCCATCGACG CCCTACGAGC TCAAGCGCGC CGCAGGGCGG
TCAGTAGCGT TCTTCTGGCC GTTTCCACAT ACCCAGTTCT ATGCGGAGCC TGAACGGTTG
CACCAGTTGG GCCTGCTCGA TCTTGAGGGC GAGAAGACCG GCCGCCGACG CAAGACTTAT
CGGCTCACCC CTGGCGGACG CGAGGCGCTG AGCCATTGGC TCGCCATCCC TCCAGACACC
ATCTTCGAAG TGCGCGATAT GGCGGTGCTC CAACTATTCT TCGGAGAGTT TATGAGCACG
CAGGACCTCA AGGAACTCGC CCGCAAACAG GTCGAACTCT GCGACGAACG ACTCGCCGTC
TACAAACAGC TCCGCGAACA CAACGCGTCG CGAATGGAGC AAGGTCGTCG AATGGCTCCA
CTTACCCTCG GCCTACGCTT GACCACCACA ATGCGGACCT TTTGGCTGGA AATCGAGAAT
AACCCGCCAC AGTGA
 
Protein sequence
MSGSTPSQGP RLSPTSYLVL GLISLRGPST PYELKRAAGR SVAFFWPFPH TQFYAEPERL 
HQLGLLDLEG EKTGRRRKTY RLTPGGREAL SHWLAIPPDT IFEVRDMAVL QLFFGEFMST
QDLKELARKQ VELCDERLAV YKQLREHNAS RMEQGRRMAP LTLGLRLTTT MRTFWLEIEN
NPPQ