Gene Franean1_3133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3133 
Symbol 
ID5671511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3687575 
End bp3688279 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content69% 
IMG OID641242030 
Producthypothetical protein 
Protein accessionYP_001507450 
Protein GI158314942 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3473] Maleate cis-trans isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGGGA TACGGTCCGG CGATGACGTC CGACGGGTTG GTGTGCTGAT CGAGGCGTCC 
CACCGCACAA TCGAGTCCGC CCTGTGGTCG GCGCTGCCGC CTGGTGTCAC CCTCACCACC
GCGCGGGTCT CGGACCCGGC CCGACCCGGG TCGCAGGACC ACGGTGGCGA GCACCTCGAC
CCGTTGGTGG CCGGTCTGGA CAGTGTCATG ACGACGGAGC CGCAGGCCGT GGTGGTGGCC
ATCGAGAGCG CGGGCTTGGG CTCCGGTCTG GCCGGTCTGC GTGACATCGA GCATTCCCTG
TCCGCGCATG CCCAGGTCCC TGTCGTCACC GTGAGCGGGG CGGTGGTCGA GTGGTTGCTG
GTGCGCCCGT GGCTGCGGAA CCTTGCCCTC GTCGCTCCTG TCGACCCGTG GGTGCACGAA
CAGTTTGTCC GGGTGCTGCG CGAGGCGTCC CTGCAGGTCG GTATCGGTGC GGACGAGCCT
CTCGTCGAAG CGTTGGCGAC ATCTCAGCGG GTTGTCGGAG CCTACCGGGC CTGCGCGGCC
TCAGGTCCCG ACGTCATCGT CCAATGGGGC GGTCAGGTCT TCCCTGATGT CGTCGGCGGC
CTCTCGCAGT GGACGAGATC GCCCGTCGTG TGGAGCGTCC ACGCCCTCCT GGAGGTCACC
CTCGACCGCA TGTCACGCAG CACGCCCCGA TTCGCTGTGC CGTAG
 
Protein sequence
MTGIRSGDDV RRVGVLIEAS HRTIESALWS ALPPGVTLTT ARVSDPARPG SQDHGGEHLD 
PLVAGLDSVM TTEPQAVVVA IESAGLGSGL AGLRDIEHSL SAHAQVPVVT VSGAVVEWLL
VRPWLRNLAL VAPVDPWVHE QFVRVLREAS LQVGIGADEP LVEALATSQR VVGAYRACAA
SGPDVIVQWG GQVFPDVVGG LSQWTRSPVV WSVHALLEVT LDRMSRSTPR FAVP