| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3121 |
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| Symbol | |
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| ID | 5671499 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 3675017 |
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| End bp | 3676975 |
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| Gene Length | 1959 bp |
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| Protein Length | 652 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641242018 |
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| Product | thiamine pyrophosphate protein central region |
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| Protein accession | YP_001507438 |
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| Protein GI | 158314930 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3962] Acetolactate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGGCC AGCCCCGCGT CCACGGCCCC GACGAACGGC TGATCGACGT GCTGGCCGCG
GTCCCCACCC CTGCTCCTCG GGAGGCACCG ATGAGACTCA CCATGGCACA GGCGCTCGTG
CGCTTCCTTG CCAACCAGTA CTCCGAGCGA GACGGCGTAG AGCAGCGGCT CGTCCCCGGC
ATGTGGGGCA TCTTCGGCCA CGGCAACGTC GCCGGCCTCG GGCAGGCGTT GTTACAGGCC
GTCCGCACCG GCGAAGCGGA TCTGCCGTAC TACCTGGCCC GCAACGAGCA GGGCCAGGTC
CACGCGGCCG CGGCGTTCGC CAAGATGCGC AACCGGCTGC AGGCCTTCGC GTGCACCGCG
TCTACCGGCC CCGGTTCGAC GAACATGATC ACCGGCGCGG CGCTGGCGAC CACCAACCGA
CTGCCCGTCC TGCTGCTGCC CAGCGACATG TTCGCGACCC GCTACCCGGA TCCGGTGCTG
CAACAGCTCG AGGACACCCG CGGCGGCGAC GTGACCGTAA ACGACGCTTT CCGCCCGGTG
TCGAAGTACT TCGACCGCAT CACCCGCCCC GAGCAAATGA TCCCAGCCGC TCTCGCTGCG
ATGCGGGTGC TCACCGATCC GGTCGAGACC GGCGCAGTGA CGCTCGCGCT GCCGCAGGAC
GTACAGGCCG AGGCCTACGA CTGGCCGGAG GACTTCTTCC GCCGGCGCGT GTGGCATGTC
AGACGTCCGG CCCCTGAGCC GGAGGCGCTC GCCAGGGCCG TCGAGCTGCT GCGAACTGCC
AGGTCACCGC TGATCGTCGC CGGTGGCGGT GTCGTGTACT CCGAGGGCGA GCGGGAACTG
CGGGCCTTCG CCGAGATGAC CGGCATCCCG GTGGCGGACA CACACGCAGG GAAGGGAGCG
GTGCCGTGGG ACCACCCGTG CGCGGTGGGT GGCATCGGCT CGACCGGCAC CTCCGCGGCC
AATGCACTCG CCGCCGGGGC AGATGTCGTG CTGGGTATCG GCACCCGCTA CAGCGACTTT
ACCACCGCAT CGCACACCGT CTTCAAGAAC CCTGACGTCA CGTTCGTGAA CCTCAACGTT
GCCCCGTTGG ACGCAGCGAA GCACTCCGCG GAAATGCTGG TAGCGGACGC CAAACGCGGC
ATCGTGGCAC TGCACAGGAC CCTGCGCGGC TGGCAGGTCG GCGACGCCTA CCGGTCCCGC
ACGCGGACCC TGGCCGACGA CTGGAACCGC AGGGTCGATG CCTGCGTCAC CCCCGGCCAC
GGCCCATATC CCGCCCAGAC GGAGATCCTT GGCGCACTCA ACAAGGCCCT CTGCGACCGG
GACGTGGTGA TCAACGCAGC CGGGTCGATG CCCGGTGACC TGCAGCTGCT GTGGCGGGCG
AGGGACCCCA AGGCCTACAA CGTTGAATAC GCCTATTCCT GCATGGGATA CGAGGTCGCC
GCCGGAGTCG GGACGAAGAT GGCCGCACCC GACCGTGACG TCGTCGTCCT GGTCGGCGAT
GGCTCCTACC TGATGATGGC GCAGGAAATC GTCACGATGG TCGCCGAGGG CCTCAAGGTG
ATCATCGTAC TGGTGCAGAA CCACGGATTC GCCTCGATCG GCTCACTGTC GGAATCCCTG
GGATCACAGC GATTCGGCAC ATCGTACCGC TACCGCGACA AGTACTCCGG CCTGCTCGAC
GGCGCTTTGC TGCCGATCGA CCTCGCGGCC AACGCGGCCA GCCTCGGCGC GACTGTGATC
CGGGCCGCCA CCGTCGTGGA GTTCACCACC GCGATCGCTG CGGCCAAAGC CAACACCACG
ACTACCGTCG TTCACGTCGA AACTGACCTT TTTGGCCCCA ACCCGCCCAG CTCAGCCTGG
TGGGACGTAC CGGTCTGCGA GGTCTCCGAG CTGGAATCAA CGCAGAAGGC CTACGAGACG
TACTCTGCCG CCAAGAACAC GCAGCGGCAC TACCTGTAG
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| Protein sequence | MGGQPRVHGP DERLIDVLAA VPTPAPREAP MRLTMAQALV RFLANQYSER DGVEQRLVPG
MWGIFGHGNV AGLGQALLQA VRTGEADLPY YLARNEQGQV HAAAAFAKMR NRLQAFACTA
STGPGSTNMI TGAALATTNR LPVLLLPSDM FATRYPDPVL QQLEDTRGGD VTVNDAFRPV
SKYFDRITRP EQMIPAALAA MRVLTDPVET GAVTLALPQD VQAEAYDWPE DFFRRRVWHV
RRPAPEPEAL ARAVELLRTA RSPLIVAGGG VVYSEGEREL RAFAEMTGIP VADTHAGKGA
VPWDHPCAVG GIGSTGTSAA NALAAGADVV LGIGTRYSDF TTASHTVFKN PDVTFVNLNV
APLDAAKHSA EMLVADAKRG IVALHRTLRG WQVGDAYRSR TRTLADDWNR RVDACVTPGH
GPYPAQTEIL GALNKALCDR DVVINAAGSM PGDLQLLWRA RDPKAYNVEY AYSCMGYEVA
AGVGTKMAAP DRDVVVLVGD GSYLMMAQEI VTMVAEGLKV IIVLVQNHGF ASIGSLSESL
GSQRFGTSYR YRDKYSGLLD GALLPIDLAA NAASLGATVI RAATVVEFTT AIAAAKANTT
TTVVHVETDL FGPNPPSSAW WDVPVCEVSE LESTQKAYET YSAAKNTQRH YL
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