Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_3120 |
Symbol | |
ID | 5671498 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 3674059 |
End bp | 3674655 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641242017 |
Product | hypothetical protein |
Protein accession | YP_001507437 |
Protein GI | 158314929 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGACCTAC CCCCACCGAA CCGGACGACC ACCGATCAGC CCGGAGATCG CGACCCTCGT CGAGCGGCTC GCGACCGAGA ACACGGCATG GAGGGGTACC AGCGGATCCA GGGCGAGCTC CTCAAGCTCG GCCACAAGGT CGGCGCGACC ACGATCCGCC GGATCCTGAC GTCCCTCGGG CTGCCCCCAG CACCGAAACG CCAGACCGAC ACGACGTGGC GGCAGTTCCT GCGCACCCAG GCATCGATCA TGCTGGCGGT CGACTTCTTC CACGCGGACC AACCTGGATT GATGCGCCTC TTTGTTGAAT CCGCCGCCGC CGCCACGGAC CCGTCACATC CGGCGCACGA GTTCTACGCA CGACGCTACG AAGAGCTATC GTCCTACATC GTGTCTCGCC TGGCTGGACC AGTGGAGGCC GGACGGATCC GCGGAGACGT GCCACTCGAG GACGTTGCGC GCCTTCCGCT CGCTGTGATC GACGGTCTCC GGATGCAGTG GCTACTCAAC CCGGCGGTCG ACATGGCCAA ACTCGCGGAG AGTTTTATCC GCCTGTACAT CACGTCATCC ACCCCGGACA CCTTCCCACC CCGTTGA
|
Protein sequence | MDLPPPNRTT TDQPGDRDPR RAARDREHGM EGYQRIQGEL LKLGHKVGAT TIRRILTSLG LPPAPKRQTD TTWRQFLRTQ ASIMLAVDFF HADQPGLMRL FVESAAAATD PSHPAHEFYA RRYEELSSYI VSRLAGPVEA GRIRGDVPLE DVARLPLAVI DGLRMQWLLN PAVDMAKLAE SFIRLYITSS TPDTFPPR
|
| |