Gene Franean1_3111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3111 
Symbol 
ID5671490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3667710 
End bp3668138 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content72% 
IMG OID641242009 
ProductMarR family transcriptional regulator 
Protein accessionYP_001507429 
Protein GI158314921 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGATACC CTCGCCGCAT GGCATCCGCC GAGCGGCCTG ACGGCCTCGC CCGCTCGCTG 
CTGGAGCTGC ATCGGGAGAT GCGGGTGATA CTCGGGTCCG TTGCGCGCGG CGCCGGGCTC
ACCGTCCAGC AGGTCGAGAT GCTCTGCCTG CTACACAACC GCCAGCCCGC CCTCGGCGAG
CTCGCCGACC TGCTCGGCTG CGACAAGACC AACATCACCG GCATGGCCGA CCGGCTGGTC
CGCCGAGGTC TCGTCACCCG CCGGGCTAAC CCGGAGGACC GGCGTGTCAC CCGCCTTGAG
CTCACCGAGG ACGGCCGGGC CTACGGACTC AAGCTCCGCG ACGCGGTTGC GAGCGCCGTC
GACGAGCGGT GGCGCTCACT CCCGGATGCC GACCGCGACG CACTCATTCA GCTCGTCGGG
CGCGCCTGA
 
Protein sequence
MGYPRRMASA ERPDGLARSL LELHREMRVI LGSVARGAGL TVQQVEMLCL LHNRQPALGE 
LADLLGCDKT NITGMADRLV RRGLVTRRAN PEDRRVTRLE LTEDGRAYGL KLRDAVASAV
DERWRSLPDA DRDALIQLVG RA