Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_3110 |
Symbol | |
ID | 5671489 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 3666898 |
End bp | 3667638 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641242008 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001507428 |
Protein GI | 158314920 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGGCAT CCGAGCGCGG GGTGGCGTTG GTGACCGGCG GCTCACGGGG TATCGGGCGG GCCATCGCCG AACGCCTCGC CGCGACGGGG AACAGCGTGA TCGTCAACTA CCGTTCGCAC GGTGCCGCCG CCGCGGAGGT CGTCGACGCC ATCGGCCGGG CCGGCGGTGT CGCCATGGCG GTACAGGGCG ACGTCACCGA TCAGGAACAG GTGCGTGAGC TGTTCGAGGT GGCCGAGCGG CGGTTCGGCC GGCTGGACAC CGTGGTCAGC AACGCAGGTG TCGCCCGGTT CGCGTCCATC GCGACGGCGA CCGACGAGGA CTTCGAGCAG AGCTTCGCCA CCAACACCCG GGCCGCCTTC GTCGTGCTGC GGGAGGCAGC CAACCGGGTG CGTGATGGCG GCCGGGTGGT GGTGATCTCG TCCGGGGTGA CACTCACCCG CCGCCCCGGC ACCGGGGTCT ACGGTGCGAG CAAGGCAGCG GTCGAACACC TGGTCCGTGT GCTGGCGAAG GAACTCGGTC CCCGGCAGGT CACCGTGAAC TGCGTGCTCC CCGGCGGCAC CCGCACCGAC GCACTCACCA CCGGTGTTCC CGCGGACGTG TTGGAACGGA TGGCCACCGA GGCCCCGCTG GGCCGCATCG GCGAGCCGGA CGACATCGCC GAGATCGTGG CGTTCCTCGC CTCGCCCGGC GGCCGCTGGG TTACCGGCCA GTCCATCGCC GCCGGCGGAG GCGTGTTCTG A
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Protein sequence | MMASERGVAL VTGGSRGIGR AIAERLAATG NSVIVNYRSH GAAAAEVVDA IGRAGGVAMA VQGDVTDQEQ VRELFEVAER RFGRLDTVVS NAGVARFASI ATATDEDFEQ SFATNTRAAF VVLREAANRV RDGGRVVVIS SGVTLTRRPG TGVYGASKAA VEHLVRVLAK ELGPRQVTVN CVLPGGTRTD ALTTGVPADV LERMATEAPL GRIGEPDDIA EIVAFLASPG GRWVTGQSIA AGGGVF
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