Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_3102 |
Symbol | |
ID | 5671481 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 3660747 |
End bp | 3662210 |
Gene Length | 1464 bp |
Protein Length | 487 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641242000 |
Product | radical SAM domain-containing protein |
Protein accession | YP_001507420 |
Protein GI | 158314912 |
COG category | [C] Energy production and conversion |
COG ID | [COG1032] Fe-S oxidoreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGTGC TGCTGGTCCA TCCCAGTGCG TTGATGTATT CGGAGATCTT CCTGCGACTC GAGCCTCTGG GTCTTGAACG CGTGGCCGCA TCGCTGCTCA TGGCCGGGCA CGAGGTCCGC CTGATCGATC TTCAGACCGC CGACATACGG GACTACACCC GAGCGTTGGT GGATTTCCGG CCGCAGACCG TGATGTTCGG CCTGAATTAC CTGGCCAACG TCCCAGAAGT CATCATGCTC GCGAAACAGG CCAAAATCAC CCGGCCAGGA TGTTTGGTGA TCGCCGGTGG TCACAGCGTC TCGTTCATCG CCCAGCACCT CCTCGAGAAC TGCGACGAAG CAATCGATGC GGTGGCCCGG GGAGAGGGCG AGGTCGTCGC TCCCCGGATC CTCGAAGCCG ACTGGGACAG CCTCACCGAG GTCCCGGGAG CGGTCACCCG CGCCGGGTCC GGGCCCCCGC CGACCATGCT GCCCACCCTC GACGAGCCGC TCCCGGCCCG TTACCTGCTC GCCCGCCGCA ACCGGTACTT CATCGGCGAG CTCGACCCGT GTGCATCGGT GGAGTTCACC CGCGGCTGCC CCTGGGACTG CTCGTTCTGC AGTGCCTGGA CGTTCTACGG GCGCAGCTAC CGGCGGATGT CGGCGGACGC GGCCGGACAC GAACTCGCCT CCATCCGCGA GCCCAACGTC TTCCTCGTCG ACGACGTGGC CTTCATCAAA CCCGACCACG GCAATGCCAT CGCCGACCAA ATCGAACGCC GCGGCATCCG AAAGCGCTAC TACCTGGAGA CCCGCGCGGA CGTCCTGCTG CGCCATCCCG AGGTCTTCCA ACGCTGGCGC CGGCTCGGCC TGACCTACAT GTTCCTCGGC ATGGAGGCCC TCGACGCCGA GGGACTCGAC CTGTTCCACA AGCGCATCTC CCCCGACGAG AACATCAAGG CCCTCGAACT CGCCCGCAAG ATCGGCATCA CCGTGGCGGT GAACCTCATC GCCGACCCCG CCTGGAGCCG TGACCAGTTC CGGCTGGTCC GACAATGGGC CCTGTCCGTA CCGGAAATCG TCCACCTGAC CGTCATGACG CCCTACCCGG GCACCGAGAT CTGGCACACC CAGTCCCAGA AACTGACCAC GCTGGACTAC CGCCTGTTCG ACATCCAGCA CGCGGTCACC CCGACCAGCC TTCCCCTCGA CGAGTTCTAC CGCGAACTCG TCGCGACCCA GGCCGTACTG AACCGCAAGC ATCTCGGCGT CAAGGCACTG GCCGCTACCG CACGTATCGT CGCCGGGCAT CTCACCCACG GTCAGACGAA CTTCCTGCGC ATGCTCTGGA AGTTCCCACG GGTCTACAAC GCCACGCGGC TCCACGCCGA ACACGGCCAG CCCGCCCGCT ACTGTCTGCC CGCACCGACC CACGCAGGGG TGAGCCGCCG GCGACGCGAG CTGTACATTC ACCAGCCTAT TTAG
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Protein sequence | MRVLLVHPSA LMYSEIFLRL EPLGLERVAA SLLMAGHEVR LIDLQTADIR DYTRALVDFR PQTVMFGLNY LANVPEVIML AKQAKITRPG CLVIAGGHSV SFIAQHLLEN CDEAIDAVAR GEGEVVAPRI LEADWDSLTE VPGAVTRAGS GPPPTMLPTL DEPLPARYLL ARRNRYFIGE LDPCASVEFT RGCPWDCSFC SAWTFYGRSY RRMSADAAGH ELASIREPNV FLVDDVAFIK PDHGNAIADQ IERRGIRKRY YLETRADVLL RHPEVFQRWR RLGLTYMFLG MEALDAEGLD LFHKRISPDE NIKALELARK IGITVAVNLI ADPAWSRDQF RLVRQWALSV PEIVHLTVMT PYPGTEIWHT QSQKLTTLDY RLFDIQHAVT PTSLPLDEFY RELVATQAVL NRKHLGVKAL AATARIVAGH LTHGQTNFLR MLWKFPRVYN ATRLHAEHGQ PARYCLPAPT HAGVSRRRRE LYIHQPI
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