Gene Franean1_3097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3097 
Symbol 
ID5671476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3655928 
End bp3656767 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content70% 
IMG OID641241995 
Productamidohydrolase 2 
Protein accessionYP_001507415 
Protein GI158314907 
COG category[R] General function prediction only 
COG ID[COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGGATG CCGAGGGGTT GCCCGCGGGC CCGGTCGTGG ATGCCTGGAT GCAGCACCCC 
ACGGTCCGGT TCCTGCGCGA GGACATGTTC GCGTCGCTGC ACCGGTGGAC TGGCGCCGCG
GAGCCAACCG GCGAGCTGCC CCTGGACGCG ACCGTCCGGG CACTCGACGA CGGCGGGGTT
GACCGGGGGC TGATCTGCGC CTGGTACGGC CCGGCCGGTC CGCTGATCTC CAACGACGAG
GTGGACGCCT GCGTCCGGGC TCGACCAGAC CGGTTCCGTG GCGTCGCCTC GGTCGACATC
CGCTACCCGA TCGCCGCCAT CGGCGAACTC CGCCGTGCCG TGCAGGACCT GGGGTTCGTC
GCGCTGCGGA TCGTGCCGTG GCTGTGGGGG CTGCCGCCGA ACGACCGGCG GTACTACCCG
CTGTTCGCCA CCTGCGTCGA GCTGGGTATC CCGCTCTGCA CCCAGGTCGG GCACACCGGC
CCGCTGCGCA CCTCGGAGAC CGGGCGGCCG ATCCCGTACC TCGACGACGT GGCACTGGAA
TTCCCGGAGC TCGTCATCGT CGCCGGACAC ATCGGCTACC CGTGGACCAA CGAGATGATC
GCGCTCGCGA CGAAATACCC GAACGTCTAC ATTGACACCT CCGCCTACGC CGCCCACCGG
TATCCCCCGG AGCTGGTCAC CTACCTACGG GAGCACGGCC AGGCCAAGGT CCTGTTCGGG
ACGAACTATC CGATGATCAC TCCGCGGCGG GCTCTCGAAC GCCTTGGCGA GCTCGGTCTC
GACAGCGAGG CTCGGGCAGC GTTCCTCGGC GGGAACGCCA CCAGGGTGTT CCGCATCTAA
 
Protein sequence
MVDAEGLPAG PVVDAWMQHP TVRFLREDMF ASLHRWTGAA EPTGELPLDA TVRALDDGGV 
DRGLICAWYG PAGPLISNDE VDACVRARPD RFRGVASVDI RYPIAAIGEL RRAVQDLGFV
ALRIVPWLWG LPPNDRRYYP LFATCVELGI PLCTQVGHTG PLRTSETGRP IPYLDDVALE
FPELVIVAGH IGYPWTNEMI ALATKYPNVY IDTSAYAAHR YPPELVTYLR EHGQAKVLFG
TNYPMITPRR ALERLGELGL DSEARAAFLG GNATRVFRI