Gene Franean1_3096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3096 
Symbol 
ID5671475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3655030 
End bp3655449 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content68% 
IMG OID641241994 
Productsignal-transduction protein 
Protein accessionYP_001507414 
Protein GI158314906 
COG category[T] Signal transduction mechanisms 
COG ID[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAGCA CTGTTGCCGA CGTGATGACG CGGAACCCTG CGACCGTCGG GATGGACCAG 
CCGATCGCCG AGGCGGCCCG ACGCATGAAG ACCGTCAACG CTGGGGATGT CATCGTCCTC
GACAACACCG GCAGGGTAGC CGGGATCGTG ACCGACCGGG ATATCACCCT GCGGGTGGTG
GCCGAGGGGC GGGATCCCGA ACGGACAGCG ACCCGGGAGG TCTGCACCCA GACAGGGCTC
ATCACGATCG CCCCGGACAC GACCACGGAC ACCGCGGTGC AGCTGATCCG TGAGCGGCAC
ATCCGCCGGC TCCCGGTCGT CGACAAGGGC CGTCCCGTCG GTGTGATCAG CCTCGGTGAC
CTTGCACGCG CGCTGGACCC CTCCTCGACG CTCGCCGAGG TAAGCGCAGC CCAGCGATAG
 
Protein sequence
MASTVADVMT RNPATVGMDQ PIAEAARRMK TVNAGDVIVL DNTGRVAGIV TDRDITLRVV 
AEGRDPERTA TREVCTQTGL ITIAPDTTTD TAVQLIRERH IRRLPVVDKG RPVGVISLGD
LARALDPSST LAEVSAAQR