Gene Franean1_3091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3091 
Symbol 
ID5671470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3649766 
End bp3650128 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content64% 
IMG OID641241989 
Productpoly-gamma-glutamate synthesis protein 
Protein accessionYP_001507409 
Protein GI158314901 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2843] Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCCATC GTCTTGCCGT CGCTATCGTG CACGGACACT CGTCGCACCA TCCACGGCCT 
GTCGAGATAT ACCGGGACAG GCTCATCCTG CACGGGTGCG GCGATTTCAT CGACGACTAT
GAGGGGATCG CCGGCTACGA AAGCTATCGG GACGACCTGC GGCTGGCGTA CTTCGTGTCG
GTCGATCCGG GCAGCGGGAA TCTGATCGAC CTGCGTGTGA TGCCCCTGCA GGCACGGCAG
ATGCGACTCC GGTACGCCGG CCCCGAAGAC TCCGCCTGGC TACAGGAGAT TCTTGACAGC
ATCAGCCGCG GCTTCGGGAC ACGGTTCGGC CTTCAGGCGG ACGGCATGCT CTCGCTCCGC
TGA
 
Protein sequence
MGHRLAVAIV HGHSSHHPRP VEIYRDRLIL HGCGDFIDDY EGIAGYESYR DDLRLAYFVS 
VDPGSGNLID LRVMPLQARQ MRLRYAGPED SAWLQEILDS ISRGFGTRFG LQADGMLSLR