| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3089 |
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| Symbol | |
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| ID | 5671468 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 3647182 |
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| End bp | 3648072 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641241987 |
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| Product | integrase catalytic region |
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| Protein accession | YP_001507407 |
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| Protein GI | 158314899 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2801] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.175977 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGACA AGTACGAACT GATCGCCGCG GAGAAGGACA ACTACCCGGT CACCAAGATG
TGCCAGTGGC TCGTCGTGTC GACATCCGGT TTCTACGACT GGCACCGCAG GCCCGCGTCG
ACCCGGACCC GTCGGCACAC CACCCTCGAC ACCCACGTCC GGGCGGTGTT CGCCGCCTCC
CGCCAGACCT ACGGCGCCCG GCGGATCGCC GCCGCCCTGA CCGCCTCCGG CCTGCGCGTC
TCCGTCCGCC TCGCCCGACG GATCATGCGC CGCGCAGGGC TGGAAGCCTG CCAGCCCAGG
GCCTACCGCC GCACCACCAT CCCCGGCCAG GCCCCGGCGC CCGCCGACCA CGTCCGCCGC
GACTTCACCG CCACCCGCCC CGGCGAGAAG CTCATCGGGG ACATCACCTA TATCCGCACC
GGCGAAGGAT GGCTCTACCT CGCCACCGTC ATCGACTGCT ACTCCCGTAA AGTCGCCGGC
TGGTCGATGG CCACCCACCT GCGCACCGAG CTCATCATCG ACGCGTTCAC CATGGCCGCC
TCCCGCACAA CCCTCGCACC GAACGCGCTT TTCCACTCCG ATCGTGGCGC CCAATACACG
TCGGATGCCT ACCATCGCGT CCTGAAACGC CATGGAGTAC GCCCGTCGGT CGGCGCCACC
GGAGTCTGCT GGGACAATTC CGCTGCAGAG TCGTTCTTCG GAACGCTCAA GAACGAACTC
GTGTACCGGG AAAACTACCC AACCCGCCGC GCCGCACGTA CCGCGATCGC CGAATACATC
GAGGTCTTCT ACAACCGGCA GCGGCTCCAC TCCACTCTCG GCTACCGCAC TCCCGAAAAC
ATCGAGCGCG CATACCACTC AACCCAGAAC GAGGTGATAG AAGCAGCATA A
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| Protein sequence | MTDKYELIAA EKDNYPVTKM CQWLVVSTSG FYDWHRRPAS TRTRRHTTLD THVRAVFAAS
RQTYGARRIA AALTASGLRV SVRLARRIMR RAGLEACQPR AYRRTTIPGQ APAPADHVRR
DFTATRPGEK LIGDITYIRT GEGWLYLATV IDCYSRKVAG WSMATHLRTE LIIDAFTMAA
SRTTLAPNAL FHSDRGAQYT SDAYHRVLKR HGVRPSVGAT GVCWDNSAAE SFFGTLKNEL
VYRENYPTRR AARTAIAEYI EVFYNRQRLH STLGYRTPEN IERAYHSTQN EVIEAA
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