Gene Franean1_3088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3088 
Symbol 
ID5671467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3646895 
End bp3647185 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content62% 
IMG OID641241986 
Producttransposase IS3/IS911 family protein 
Protein accessionYP_001507406 
Protein GI158314898 
COG category[L] Replication, recombination and repair 
COG ID[COG2963] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.18504 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAGT CACGCAGGCG ATACACACCC GAGTACAAAG ACGAGGCGGT GAAGCTCGTC 
ATCGATTCGG GCCGCCCCAC ATCGGCGGTC GCGAAAGATC TCGGTATCAA CGAGGGAACG
TTGGGGAGCT GGGTCGCGAC CTGGCGGCGG GCACACCAAA ACGAAGAAGA ACCGCTGTCG
ATGTCCGAAC GGGCCCGGCT CCGCGAGCTG GAGAAGGAGA ACCGGGAACT CCGGATGGAG
CGCGAGTTCC TCTCAAAAGC GACCGCCTTC TTCGCGCAAC GCCATCAGTG A
 
Protein sequence
MSQSRRRYTP EYKDEAVKLV IDSGRPTSAV AKDLGINEGT LGSWVATWRR AHQNEEEPLS 
MSERARLREL EKENRELRME REFLSKATAF FAQRHQ