Gene Franean1_3079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3079 
Symbol 
ID5671458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3633680 
End bp3634159 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content69% 
IMG OID641241977 
Producthypothetical protein 
Protein accessionYP_001507397 
Protein GI158314889 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACG CCACCTGGAC CCTGGTGACC GACGTCGTGG GCCGCGTGCA GCAGTCCATC 
CGCATGACCG ATTACCCGGC GATCGTCATC CTCGACGGGG ACCGCCGCCA GATTCTGTCT
GACTACGACT ACGTCCATGG CGAGACCACC CGGACCGACT TCGAGACCCG CGCCGCCGAC
CATGCCCGCA CCCTGCACGC CCGCCGGTTC ACCTTCGCCG TCCCGCAGAT CATCGAGATG
CTCCCCGGCG GGCTGCAAGC CCACGAGTTC TCAGTCCGGC CCCTGCGCGA CGGCGAACAG
GAAAGCGTGG TCTGGACCGC CTACGATGCC GACGACGGCG TCGACTACGG CTGGGCCCCC
TACACCCGCC GGCCGGCCGG CCAGCCGATC TTCGACGAGC CCAGCACGTT CCACCTGCCT
GCGCTGCCGA CCGACGGCTT CCCCGGCGTC CATCTGCTCC GTCTCCTCAC CAACGAGTAA
 
Protein sequence
MNDATWTLVT DVVGRVQQSI RMTDYPAIVI LDGDRRQILS DYDYVHGETT RTDFETRAAD 
HARTLHARRF TFAVPQIIEM LPGGLQAHEF SVRPLRDGEQ ESVVWTAYDA DDGVDYGWAP
YTRRPAGQPI FDEPSTFHLP ALPTDGFPGV HLLRLLTNE