Gene Franean1_3074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3074 
Symbol 
ID5671453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3629141 
End bp3629491 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content64% 
IMG OID641241972 
ProductNLP/P60 protein 
Protein accessionYP_001507392 
Protein GI158314884 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGGTAC AGTTTGCCTG CACGCAGATC GGCAAGCCGT ACGTGTGGGG CGGTAACGGT 
GACCCGGGAT TCGACTGCTC CGGCCTCACT TACGCTGCGT ACGCCGCCGC CGGTATCGAT
ATTCCACGGA CAGCCCAAAC CCAGCACGAC GCCGGTCCGC CGCTGCCGGC CGGAACGCCT
CTTGAGCCAG GTGACCTGGT GTTCTTCGGC ACCCAGAGGA ACATCCATCA TGTCGGGATC
TCCCTCGGAG GAACGATCAT GATCGACGCA CCTGATTTCG GAAGATCGGT GACGATCCGC
GACTTCCAGG CCTTTCCCGA CTATGCGGGT GCCTCCCGGC CGGCACAGTA G
 
Protein sequence
MAVQFACTQI GKPYVWGGNG DPGFDCSGLT YAAYAAAGID IPRTAQTQHD AGPPLPAGTP 
LEPGDLVFFG TQRNIHHVGI SLGGTIMIDA PDFGRSVTIR DFQAFPDYAG ASRPAQ