Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_3074 |
Symbol | |
ID | 5671453 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 3629141 |
End bp | 3629491 |
Gene Length | 351 bp |
Protein Length | 116 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641241972 |
Product | NLP/P60 protein |
Protein accession | YP_001507392 |
Protein GI | 158314884 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGGTAC AGTTTGCCTG CACGCAGATC GGCAAGCCGT ACGTGTGGGG CGGTAACGGT GACCCGGGAT TCGACTGCTC CGGCCTCACT TACGCTGCGT ACGCCGCCGC CGGTATCGAT ATTCCACGGA CAGCCCAAAC CCAGCACGAC GCCGGTCCGC CGCTGCCGGC CGGAACGCCT CTTGAGCCAG GTGACCTGGT GTTCTTCGGC ACCCAGAGGA ACATCCATCA TGTCGGGATC TCCCTCGGAG GAACGATCAT GATCGACGCA CCTGATTTCG GAAGATCGGT GACGATCCGC GACTTCCAGG CCTTTCCCGA CTATGCGGGT GCCTCCCGGC CGGCACAGTA G
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Protein sequence | MAVQFACTQI GKPYVWGGNG DPGFDCSGLT YAAYAAAGID IPRTAQTQHD AGPPLPAGTP LEPGDLVFFG TQRNIHHVGI SLGGTIMIDA PDFGRSVTIR DFQAFPDYAG ASRPAQ
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