Gene Franean1_3060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3060 
Symbol 
ID5671439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3599273 
End bp3600592 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content70% 
IMG OID641241958 
ProductL-lysine 6-monooxygenase (NADPH) 
Protein accessionYP_001507378 
Protein GI158314870 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3486] Lysine/ornithine N-monooxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGAAG TGAAGACTCG GTCGGATGCG GTGGGCATGC TACCCGATGT GGTCGACATC 
ATCGGTATCG GCTTCGGACC GGCCAACCTG AGCCTGGCAA TCGCCATTGA AGAGCGCAAC
GGCGCCCGGC CTGCCGCCGA CCGTGTGACC GCCCGCTTCG TAGAGGCCCA GCCGAGGTTC
GGATGGCACG ACGGCATGCT GCTGCCGGGC ACGACCATGC AGATCAGTTT CCTCAAGGAC
CTCGCGACCA TGCGCTCGCC CACCAGCTCG TATAGCTTTC TGAACTACCT GCACGAGCGC
GGGCGCCTGA GCGACTTCAT CAACCTGAAG AGCTTCTTCC CCACCCGGCT CGAGTTCCGC
GACTATCTGG CGTGGGCGGC CGCGCGTGTG AACGTGCCAG TCTCCTACGG GGCGAGGGCC
ACCCGCGTCG ACCACGACGG TGCGGCCTTC ACCGTCATGG TGTCGGGCGG CGGCGGCGGA
CGCGAGGCGG TCCGGGCGCG GTCGGTCGTT GTCGCGACCG GGCTGCGCCC CGTGCTCCCG
GACGGGATCG AGGCCGGCCC TCGGGTGTTC CACAACCACG GTCTGCTCAG CAGCCTCGAC
CGGCTCCCCT CCACGCCGCA CGGCCGGTTC CTCGTCGTGG GCGCTGGGCA GAGCGCCGCA
GAGGTTGCCG CCTACCTGCA TGACACCTAC CCGGCAGCGG AGGTACACGC CTCCATCCGC
AGCTTCGGCT ATGTGCCCTC CGACAACACC CCGTATGCGA ACCGCATCTT CGACCCCGCC
TCCGTCGGGG AGTACTACAC CGCTCCGCCC GACGTCAAAC AGCAGCTGCT GCGGCGGCAC
TGGTCGACGA ACTACGCCGC TGTCGACGCC GAGCTCATCG ACGACCTCTA CCGACGGGAG
TACGACGAGA AGCTGCGCGG CGTGCGGCGC CTGTTCGTGC ACCGCGTCAC CGAGGTCGAA
AGCCTGCGCG AGGGCCCGGG GGGTGTCGTC GTCGCGCTGC GCGACCTCGG GGCCCGTGCG
CGCACGCCGC TCGAGGTCGA CGCGGTGGTC TTCGCCACCG GCTTCCGCCC GTCAGACCCG
CACGGCCTGC TCGGCGACGG CATCGACCTC GAGGCCGCGC TCGACGGGGA CGAGCCGCTC
GTGGCGCGCG ACTACAGCCT GCGTGTGCCG GGGCTGGAGG GCCGCATCTT CCTCAGCGGG
GGTGTCCAGC ACAGCCACGG CCTCAGCTCG TCGCTGCTGT CGACCCTGGC CGTGCGCGCC
GGCGAGATTC TCGAGGCCGC GGTCCCCACG CACAGATCCC ACATGGCGAC GGGCAGCTGA
 
Protein sequence
MNEVKTRSDA VGMLPDVVDI IGIGFGPANL SLAIAIEERN GARPAADRVT ARFVEAQPRF 
GWHDGMLLPG TTMQISFLKD LATMRSPTSS YSFLNYLHER GRLSDFINLK SFFPTRLEFR
DYLAWAAARV NVPVSYGARA TRVDHDGAAF TVMVSGGGGG REAVRARSVV VATGLRPVLP
DGIEAGPRVF HNHGLLSSLD RLPSTPHGRF LVVGAGQSAA EVAAYLHDTY PAAEVHASIR
SFGYVPSDNT PYANRIFDPA SVGEYYTAPP DVKQQLLRRH WSTNYAAVDA ELIDDLYRRE
YDEKLRGVRR LFVHRVTEVE SLREGPGGVV VALRDLGARA RTPLEVDAVV FATGFRPSDP
HGLLGDGIDL EAALDGDEPL VARDYSLRVP GLEGRIFLSG GVQHSHGLSS SLLSTLAVRA
GEILEAAVPT HRSHMATGS