| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3056 |
|---|
| Symbol | |
|---|
| ID | 5671435 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 3594355 |
|---|
| End bp | 3595803 |
|---|
| Gene Length | 1449 bp |
|---|
| Protein Length | 482 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641241954 |
|---|
| Product | tricarballylate dehydrogenase |
|---|
| Protein accession | YP_001507374 |
|---|
| Protein GI | 158314866 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3573] Predicted oxidoreductase |
|---|
| TIGRFAM ID | [TIGR02485] precorrin 3B synthase CobZ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACAACG CGGATGTTGT TGTGGTCGGC GGGGGTAACG CCGGGTACTG CACGGCTCAC
GCGGCGGCCG AGCGCGGGCG ACGCGTGCTG CTGTTGGAGA AGGCACCGCG GGCGCTGGCC
GGGGGGAACA GCTACTACAC GCTCGGTGCG ACCCGGATGG TGCACGCCGG GCTCGGTGAT
CTGCTCGAGA TCCTTGAGCC CGATGAGCGT CACGCGCGTA CAGAAGTTCC GCCGTACTCG
GCGGCAGAGT TCCTGGCCGA CCTGGACCGG ATCACCGAGG GACGTGACGA TAAGGAACTT
GCCGCGGCTG TCATCGAAGG CTCGCGCGAC GCGGTCCGCT GGCTGCACGA ACTGGGGCTG
CGATTCCGGC TGATGTACGA GCGGCAGGCT CACGAGAACG CCGATGGAAC CTTCGTGTTC
TGGGGTGGAA CGCACGTGTG CAACGTCGAC GCGGGCCCTG GGCTGATGTC AGACCATGAA
CGCGTCGCCT CGCGGCTCGG GGTCGAGATG CGCTACGGTT GCCCGGTCAC GGGGCTGATG
ACCAACGGCG GCTCGGTCGT CGGTGTTCGC GCGGGCGATC AGGAGTTTCC GGCGGAGTCG
GTGGTGATCG CCAGCGGCGG TTTTGAGGCG AACGCGCAAT GGCGGCAACG CTACCTGGGA
GACGGGTGGC AGCACGCGAA GGTGCGTGGC ACGCCGTACA ACACCGGTGA CCTGATCGGC
GCGGCCTTGG AGATTGGTGC AGATCGTGGA GGCGACTGGT CAACGTGTCA TAGCGTGCCG
TGGGACGCGT CATATCCCGA GAACGAGAGC AACCGTATGT TGACGAACCG ACTCAGCCGG
TACGGCTATC CGCTTGGCAT CATTGTCAAC GCCTGGGGTC GACGATTCCT CGACGAGGGT
GCAGACTTTC GCAACTACAC GTACGCGAAG TACGGCAAGG TGATCCTCGA ACAGCCGGGT
TCGGTGGCGT TTCAGATCTT CGACGCGAAC TCGCGATCGA TGCTCAACGT GTACGAGTAT
GAAATGCCCG GGATCATCCC GGTCGTCGCC AACAGCGTCG AAGAGCTCGC CGCAGCCATA
GACGTCGACG TCGACGCGTT CGCGCGGACG GTCCGCGATT TCAACTCATC GATCGACACC
AGCCGTCCGC TCGATCCAAC GATCAAGGAC GGCCGCGGCG CGACGGTGGA ACCGATCAAG
AGTAATTGGG CATCGGCGAT AGAGACGCCG CCCTATTATG CATATCCGGT GACGTGTGGA
ATCAGTTTCA CCTTTGGAGG GCTTCGCGGC GACATCAACG GCCGGGTGCT CGATCCGTCA
GGTGCGCCCA TCCCCGGGCT CTTCGCGTGC GGTGAAGCGC TCGGGGGCCT CTTCAGCGGG
AACTACCCGA CGGGCGCCGG CCTGACTGCG GGAATGGTGG TCGGGCGACG CACAGGATCG
CTCGCCTGA
|
|---|
| Protein sequence | MHNADVVVVG GGNAGYCTAH AAAERGRRVL LLEKAPRALA GGNSYYTLGA TRMVHAGLGD
LLEILEPDER HARTEVPPYS AAEFLADLDR ITEGRDDKEL AAAVIEGSRD AVRWLHELGL
RFRLMYERQA HENADGTFVF WGGTHVCNVD AGPGLMSDHE RVASRLGVEM RYGCPVTGLM
TNGGSVVGVR AGDQEFPAES VVIASGGFEA NAQWRQRYLG DGWQHAKVRG TPYNTGDLIG
AALEIGADRG GDWSTCHSVP WDASYPENES NRMLTNRLSR YGYPLGIIVN AWGRRFLDEG
ADFRNYTYAK YGKVILEQPG SVAFQIFDAN SRSMLNVYEY EMPGIIPVVA NSVEELAAAI
DVDVDAFART VRDFNSSIDT SRPLDPTIKD GRGATVEPIK SNWASAIETP PYYAYPVTCG
ISFTFGGLRG DINGRVLDPS GAPIPGLFAC GEALGGLFSG NYPTGAGLTA GMVVGRRTGS
LA
|
|---|
| |