Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_3023 |
Symbol | |
ID | 5671405 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 3558026 |
End bp | 3558817 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641241925 |
Product | hypothetical protein |
Protein accession | YP_001507345 |
Protein GI | 158314837 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.386082 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCACAC CGATCCGCAT CACTGCCGGG TTGTACTCGG TCCGCCTGCG CGACGACATG CCACGCGAGG TCACCACCGC CCACTGGGCG GGCCAGCATG CCGACATCAT GCGGAAACTC CCGCACATCG ACGAATACAT CCAGCAGCAG TTCTCCGCCA CAGACCACGG CTACTGGCCC GCTACGCCCG GAGTGGGCAC CAGGGTCCCA GAGGAGTTCC GACTCGACGG CTACGCCGAG ATCCGCCTAC CCAGCATTAT CGGTGGCATC CTCAGCGCAC TGCACACCCG CGAAATCATG CTCGACGAGC AGAATCTCTT CCGCCACGTC GTCGGCAAGC TGACCGGTCC GAAGCGAGGC CGCTGGTGGC CCGACGAGGA AGGCACGCCA ATACCACACC GCACCGCGGT GCTACTGCGC CGCCGCAGCG GCACCAGCAG CCGCGACTTC CGACGATTCG TGCACGACCA ACTTGGACCT GCACTTCACG AAGCCGGAGC GCTCGACCTG CGCACCTACA CGTTCATTCC GTCCTCGAAG CTCACCCCGA GCTCTCCCGC GGTCGCCCAC AACTACCCCG TCGAGCGCCG CATCCACGGC GGACTCGTGA TCGGTGCCGA AGACAGGAGC GCGATCAGTC GAATGCTGAA AGCAGATGCT GTCGCCACAC TCACCGAACG TCAGTCCGAG CTGCTCACTG CTGCACACGC CTACACGATC GAAAGATCCG CAACTGTCAT CGACAAGACT GTGCGGCCTG GCGCAGGTCG CCGCCGCGAC ACGTCTCGAT GA
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Protein sequence | MSTPIRITAG LYSVRLRDDM PREVTTAHWA GQHADIMRKL PHIDEYIQQQ FSATDHGYWP ATPGVGTRVP EEFRLDGYAE IRLPSIIGGI LSALHTREIM LDEQNLFRHV VGKLTGPKRG RWWPDEEGTP IPHRTAVLLR RRSGTSSRDF RRFVHDQLGP ALHEAGALDL RTYTFIPSSK LTPSSPAVAH NYPVERRIHG GLVIGAEDRS AISRMLKADA VATLTERQSE LLTAAHAYTI ERSATVIDKT VRPGAGRRRD TSR
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