Gene Franean1_3023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3023 
Symbol 
ID5671405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3558026 
End bp3558817 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content65% 
IMG OID641241925 
Producthypothetical protein 
Protein accessionYP_001507345 
Protein GI158314837 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.386082 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACAC CGATCCGCAT CACTGCCGGG TTGTACTCGG TCCGCCTGCG CGACGACATG 
CCACGCGAGG TCACCACCGC CCACTGGGCG GGCCAGCATG CCGACATCAT GCGGAAACTC
CCGCACATCG ACGAATACAT CCAGCAGCAG TTCTCCGCCA CAGACCACGG CTACTGGCCC
GCTACGCCCG GAGTGGGCAC CAGGGTCCCA GAGGAGTTCC GACTCGACGG CTACGCCGAG
ATCCGCCTAC CCAGCATTAT CGGTGGCATC CTCAGCGCAC TGCACACCCG CGAAATCATG
CTCGACGAGC AGAATCTCTT CCGCCACGTC GTCGGCAAGC TGACCGGTCC GAAGCGAGGC
CGCTGGTGGC CCGACGAGGA AGGCACGCCA ATACCACACC GCACCGCGGT GCTACTGCGC
CGCCGCAGCG GCACCAGCAG CCGCGACTTC CGACGATTCG TGCACGACCA ACTTGGACCT
GCACTTCACG AAGCCGGAGC GCTCGACCTG CGCACCTACA CGTTCATTCC GTCCTCGAAG
CTCACCCCGA GCTCTCCCGC GGTCGCCCAC AACTACCCCG TCGAGCGCCG CATCCACGGC
GGACTCGTGA TCGGTGCCGA AGACAGGAGC GCGATCAGTC GAATGCTGAA AGCAGATGCT
GTCGCCACAC TCACCGAACG TCAGTCCGAG CTGCTCACTG CTGCACACGC CTACACGATC
GAAAGATCCG CAACTGTCAT CGACAAGACT GTGCGGCCTG GCGCAGGTCG CCGCCGCGAC
ACGTCTCGAT GA
 
Protein sequence
MSTPIRITAG LYSVRLRDDM PREVTTAHWA GQHADIMRKL PHIDEYIQQQ FSATDHGYWP 
ATPGVGTRVP EEFRLDGYAE IRLPSIIGGI LSALHTREIM LDEQNLFRHV VGKLTGPKRG
RWWPDEEGTP IPHRTAVLLR RRSGTSSRDF RRFVHDQLGP ALHEAGALDL RTYTFIPSSK
LTPSSPAVAH NYPVERRIHG GLVIGAEDRS AISRMLKADA VATLTERQSE LLTAAHAYTI
ERSATVIDKT VRPGAGRRRD TSR