| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3016 |
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| Symbol | |
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| ID | 5671398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 3548688 |
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| End bp | 3550865 |
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| Gene Length | 2178 bp |
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| Protein Length | 725 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641241918 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase NAD-binding |
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| Protein accession | YP_001507338 |
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| Protein GI | 158314830 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.318586 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAGCG CAGCGGTGAC CTTGGACTAC CCGGACGAGG TGGTCACCTG GGCCCACGTC
CGATACGTGT CGCTGCCCGG GGTCCGCGGC CCGGCCGCGC TGATCACCCT CGACAACGGG
CACGACCACA CCCGCCCGAG CACCTTCGGG CCGGCCGGGC TGCGCGCCCT GCTGGCCGCG
GTGGCCGAGA TCGAGGCGCA CGACCCGCCG GTCGCCGCGA TCGCGGTGAC CGGGAAGCCG
TTCATCTTCT GTGTGGGTGC CGACCTGTCC TACCGTTCGT CGCTGACGGA CCCGGCCGAG
ATCTCACCGA AGCTCACCGC CCTGGGCGAG CTGGGACATG ACGTGCTGCG CCGGGTCGGT
GAGGGGCGGC TCGCCGGCCG CAGGGTGCCG ACCTTCGCGC TGGTCAACGG CGCCGCGCTC
GGCGGCGGCC TCGAACTGGC GCTGCACTGC GACTACCGGG CGATCTCGGC CGGCGCCACG
GCGATCGCGC TGCCCGAGGT GTTCCTCGGC CTGGTACCCG CCTGGGGCGG CACCCAGCTG
CTGCCAAACC TCATAGGCGC CGAGAACGCG GTCACCCTCG TTGTCGAAAA CGCACTCATC
CAGAACCGCA CGCTGCGCGG CGAGCAGGCG TTCTCCCTCG GGCTCGGCGA CGTTCTGCTC
GAACCCGCGG ACTTCCTGGA GGAGTCGCTG TGCTGGGTCG GCCAGGTGCT GCGCGGCGAG
GTCGACCCTG CCGCAGGTCG GCGCCCGGTC AAACGTGGGG CGGCGTGGGC GGCCGCGGTT
GAGCGCGGGC GCGTCCTGGC CGACGCCCGC CTGCACGGCG CCGCGCCAGC GGCCTACCGC
GCGCTGGACC TGATCGCCCT AGCCGAGACC GCGGACCGCG ACACCGGGTA CGCCGCCGAG
ACCGCCGCTC TGGCCGACCT GGGCGCCAGC GAGGAGCTCG CCGCCGGCCT GTACGCCTTC
AACCTCGTCA ACAAGCGCGC GAAGCGGCCA GTCGGCGGGC CCGACCGCTC GCTGGCCCGG
CCGGTCACCA AGGTCGGCGT AGTCGGCGCG GGGCTGATGG CCAGCCAGCT CGGCCTGCTG
TTCGCCCAGC GCCTCGAGGT CCCAGTGGTA ATCACCGATC TCGACCAGGA CCGTCTCGAC
GCGGGCGTCG GGCGCGTCCA CCAGGAGATC GACACCCTGC TGCGGCGCGG GCGCCTCTCC
CCCGACCGGG CGAATCGGCT GAAGGCGAAC GTGACCGGCT CCCTCACTAG AGACGCGTTC
GCCGACGCCG ACCTGGTCAT CGAAGCGGTC TTCGAGGACA TGAAGGTCAA GAAGGCCGTC
TTCGCCGAGC TTGAAGCGGT GGTGAAGCCG GAGACACTGC TGCTCACCAA CACCTCGGCG
CTGTCGGTGA CCGAGATGGC CGCCGACCTG ACCCACCCGG AGCGGGTTGC CGGCCTGCAC
TTCTTCAACC CGGTGGCGGT CCTCCCGCTC GTCGAGGTGG TCCGCTCGCG GCACAGCGAC
GACGCGACCG TCGCGACCGC CCTCGACATC GCCAAGAAGC TGAAGAAGAA CGCGGTGCTG
GTCGCTGACG CACCCGCGTT CGTGGTCAAC CGCCTGCTCA CCCGGTTCAT GGGCGAGGTG
CTCGCGGGCA CCGAGTCGGG CACCCCGGTC GAGCAGGCCG ACGCGGCCCT CGACCCGCTC
GGTCTGCCGA TGTCGCCGCT GGTGCTACTC TCCCTGGTCG GCCCCCCGGT GGCCCTACAC
GTGGCAGAGA CCCTGCACGG CGCCATGCCC GAGCGCTTCC GCTCCCCGGC AGGCCTGTCC
CGGCTGGTGG CCGGGGGCAA GAGCAGCTTC TACACCACCG GGCCGAACGG GGAACAGATC
GTCGACAGGG AGGCCGCCGC CCTCGTTCGC GGGGACGGCA CCGGCCCGGC GGGCGGGGAC
CGCGCAGGGA CGGCCGGCAT CGCGTTGACC GCCGAACAGG TCCGCGAGGC CGCGCTGGCC
GCGCTGACGC AGGAGATCCG GGTACTGCTG GACGAGGGCG TGGTCACCGA GGCGGCCGAT
GTCGACCTAT GCATGATCCT CGGTGCCGGC TGGCCGTTCC ACCTCGGTGG TATCACCCCC
TACCTCGACC GCACCGGTGT CAGCGAGCGC GTCACCGGCC GCCGGTTCAG CCCGCCCGGA
GCCGCCACCA TCTCCTGA
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| Protein sequence | MSSAAVTLDY PDEVVTWAHV RYVSLPGVRG PAALITLDNG HDHTRPSTFG PAGLRALLAA
VAEIEAHDPP VAAIAVTGKP FIFCVGADLS YRSSLTDPAE ISPKLTALGE LGHDVLRRVG
EGRLAGRRVP TFALVNGAAL GGGLELALHC DYRAISAGAT AIALPEVFLG LVPAWGGTQL
LPNLIGAENA VTLVVENALI QNRTLRGEQA FSLGLGDVLL EPADFLEESL CWVGQVLRGE
VDPAAGRRPV KRGAAWAAAV ERGRVLADAR LHGAAPAAYR ALDLIALAET ADRDTGYAAE
TAALADLGAS EELAAGLYAF NLVNKRAKRP VGGPDRSLAR PVTKVGVVGA GLMASQLGLL
FAQRLEVPVV ITDLDQDRLD AGVGRVHQEI DTLLRRGRLS PDRANRLKAN VTGSLTRDAF
ADADLVIEAV FEDMKVKKAV FAELEAVVKP ETLLLTNTSA LSVTEMAADL THPERVAGLH
FFNPVAVLPL VEVVRSRHSD DATVATALDI AKKLKKNAVL VADAPAFVVN RLLTRFMGEV
LAGTESGTPV EQADAALDPL GLPMSPLVLL SLVGPPVALH VAETLHGAMP ERFRSPAGLS
RLVAGGKSSF YTTGPNGEQI VDREAAALVR GDGTGPAGGD RAGTAGIALT AEQVREAALA
ALTQEIRVLL DEGVVTEAAD VDLCMILGAG WPFHLGGITP YLDRTGVSER VTGRRFSPPG
AATIS
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