Gene Franean1_3014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3014 
Symbol 
ID5671396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3545889 
End bp3547244 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content68% 
IMG OID641241916 
Productcrotonyl-CoA reductase 
Protein accessionYP_001507336 
Protein GI158314828 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID[TIGR01751] crotonyl-CoA reductase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATGA AGGACATCAT CGATGCAGTC CTCGTCCAGG CCCCCCGCAC CGAAGCCCGC 
AGAGCCGAGT TCGAGGCCCT GTCCGTGCCC GCCGCCTATC GGGGAGTGGT GGTCCGCCGG
GACGAAGTCG GCATGTTCGC GGGCCGGGCG TCGCGGGACA AGGACCCCCG CGAGTCCCTG
CACCTCGACG AGGTGGCGAC CCCGGAAATC GGGCCGGGTG AGGCCCTGGT GGCGGTCATG
GCCTCCTCGG TGAACTACAA CACGGTCTGG ACATCGATCT TCGAACCGAT GCCGACGTTC
GGGTTCCTCG GGCGCTACGG CCGCACCTCG CCACTGGCCC GCCGCCACGA CCAGCCCTAC
CACGTGGTCG GCTCGGACCT GGCCGGCGTC GTGCTACGCA CCGGGCCCGG GGTGCACGCC
TGGGCACCGG GCGACGAGGT CGTCGCGCAC TGCCTGTCGG TCGAGCTCGA ACGTCCCGAA
GGTCATAACG ACACGATGCT CGATCCCGAA CAGCGGATCT GGGGGTTCGA GACGAATTTC
GGTGGTCTCG CCGAACTTGC GCTGGTCAAG GCCAACCAGC TCATGCCCAA ACCCGACCAC
CTCACCTGGG AGGAGGCCGC CGCCCCCGGC CTGGTCAACT CCACCGCCTA CCGCCAACTC
GTCTCCACCA ACGGCGCGAA CATGAAACAG GGCGACGTCG TCCTGATCTG GGGCGCCTCA
GGAGGCCTCG GCTCGTACGC CACCCAGCTG GCGCTACGCG GCGGCGCCAT CCCGGTCTGC
ATGGTCTCCT CACCGGCCAA AGCCGAGATC TGCCGTTCAC TGGGCGCCGA ACTCGTCATC
GACCGCGCGA GCGAGGACTA CCGGTTCTGG ACCGACGAAC ACACCCAGAA CCCGAGGGAA
TGGCAGCGCC TCGGCAAACG GATCCGCTCG CTCACCGGCG GCGACGACCC CGACATCGTC
TTCGAGCACC CCGGCAGGGA GACCTTCGGC GCATCCGTCT ACGCGGCGCG GCGCGGCGGC
ACCATCGTCA CCTGCGCCTC GACCAGCGGC TTCCTACACA GCTACGACAA CCGCTACCTG
TGGATGAACC TCAAACGCAT CATCGGCTCG CACTTCGCGA ACTACCGCGA GGCATGGGAA
GCCAACCGGC TCATCGCCCG CGGCCTGATC CACCCCACAC TGTCCCGGGT CTACCCACTC
GCCGACACCG GACAGGCCGC CCACGACGTC CACCACAACA ACCACCAGGG CAAGGTCGGC
GTCCTCTGCC TCGCCCCATC CGAAGGACTC GGCGTCCGCG ACGAAACAAC CCGGGCCCGC
CACCTCACCG CAATCAACCG CTTCCGCGGC ATGTGA
 
Protein sequence
MSMKDIIDAV LVQAPRTEAR RAEFEALSVP AAYRGVVVRR DEVGMFAGRA SRDKDPRESL 
HLDEVATPEI GPGEALVAVM ASSVNYNTVW TSIFEPMPTF GFLGRYGRTS PLARRHDQPY
HVVGSDLAGV VLRTGPGVHA WAPGDEVVAH CLSVELERPE GHNDTMLDPE QRIWGFETNF
GGLAELALVK ANQLMPKPDH LTWEEAAAPG LVNSTAYRQL VSTNGANMKQ GDVVLIWGAS
GGLGSYATQL ALRGGAIPVC MVSSPAKAEI CRSLGAELVI DRASEDYRFW TDEHTQNPRE
WQRLGKRIRS LTGGDDPDIV FEHPGRETFG ASVYAARRGG TIVTCASTSG FLHSYDNRYL
WMNLKRIIGS HFANYREAWE ANRLIARGLI HPTLSRVYPL ADTGQAAHDV HHNNHQGKVG
VLCLAPSEGL GVRDETTRAR HLTAINRFRG M