Gene Franean1_3012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3012 
Symbol 
ID5671394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3544307 
End bp3545038 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content69% 
IMG OID641241914 
Producthypothetical protein 
Protein accessionYP_001507334 
Protein GI158314826 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCGGGCC GGGGTGATGG CTCACAGGTA GCCTCGGCCA CAATCGATCA TTGCGGGCAG 
GTCGTGGGTG TTCCGGTCGA TCCACTGCCG CTGGAAGGAT CCGCCATGTT CGGGCTGGTG
GCCTCGGACC CGACGGTGTC GCGGACGGTC GACCGGCTCG CGGCCGACGT GGACAAGGTG
CTAGCCGCGA TCGACCGGGT GCGCGCGATC GCACGCGCCC GCGTGGGGTC CTGCGCCGGT
TCTCACGCGC CTGACCATCA GGTGTCGGCG GACGATCTGC TGGTTGTGGA CCTGGACGCC
ACTCTGGTCA CCGCCCATTC GGAGAAGGAA CAAGCCCGGC CGACGTTTAA CCGGGTGGTA
TCGGCTTCTG CCCGAACCTG GCGACATGCG ACAACACCGA CGACCTGCTG GTCATCGACC
CGCGACCGGG TAACGCCACC TCGAACGACG CCGCTGACAC CATCGCCACC CTCGCCCGGG
CGGTCGAACG GATCCCGGGC GCCTACCGCC ACCGGATGCT CATCCGCCTC GACGGGGCGG
GGTTCTCCCA CCAGCTGCTC GAGTACATCG CCTCCGGCGG CGGGAAGCGG GGCCGCCGCT
GGGAGTTCTC CGTCGGCTGG TCCTGCACCG ACATGGAGAC GGACGCGATC GCCACGCTCC
CGAAGAAGGC CTGGACCCAG GGCATCGACC AGGACGGCAC ACCGGTCGGG GACACGTTCG
TCGCCGAGCT GA
 
Protein sequence
MPGRGDGSQV ASATIDHCGQ VVGVPVDPLP LEGSAMFGLV ASDPTVSRTV DRLAADVDKV 
LAAIDRVRAI ARARVGSCAG SHAPDHQVSA DDLLVVDLDA TLVTAHSEKE QARPTFNRVV
SASARTWRHA TTPTTCWSST RDRVTPPRTT PLTPSPPSPG RSNGSRAPTA TGCSSASTGR
GSPTSCSSTS PPAAGSGAAA GSSPSAGPAP TWRRTRSPRS RRRPGPRAST RTAHRSGTRS
SPS