Gene Franean1_2997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2997 
Symbol 
ID5671380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3523511 
End bp3524782 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content68% 
IMG OID641241900 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_001507320 
Protein GI158314812 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATC AAAGCATGCT CGCTACCCCT CTGGGCATCG GCCCAATGAC GGTCGCCGGA 
CGGCTGTTCA AGTCCGCCAC CAGCGAGACT CGCGCCACCG CCGACGGTTT CGTCACCGAC
GAGCTCCTGG CCTTCTACGA GCCGATGATC GAGGCGGGAA CGCCGATGAT CATCACGGGC
AACCTGTACG TCTCCCTGCA GGGAAAGTCG GCGAGGCGAC AGGCAGGCAT CGACGCCGAC
GACAAGATCC CCGGCCTTCG TGACTGGACC GTCCTGGCCC ACCAGCACGA CGTCAAGATC
GTCGCTCAAC TCAACCATGG CGGCCGGCAG ATCGCCCAGG CGGCGCCCGG CGTCGACCGG
CTCGTCTCGG CCTCCGACAT ACGGGAACCC CTTTACGGGA CGAAGCCGTC CCCGCTCCGG
CTGGACGAGA TGCCCGGGGT GGTCGAGTCC TTCGCGGCGG CGGGGGCGCG CGCCCGGGAT
GCCGGATTCG ACGGAGTGCA GATCCACGCC GCCCACGGCT ACCTGCTCAG CCAGTTCCTG
ACCCCGCACA CCAACCGCCG CATCGACGCC TACGGCGGAA GCCTCGACAA CCGCGCGCGG
CTGCTGGTCG AGGTGCTGCG GGGCCTGCGC TCACGGCTCG GCGACGACTT TCCGATCCTC
GTCAAAATGA ACGGCACCGA CGACCTTCCC TTCCGTAAGG GAGCGACGAC CGAGGAGCTC
GTCGGGGTCG CCGTGCGGCT GCAGGACGAG GGGATCGACG CTGTCGAGAT CTCCCGCGGC
CACTACGAAT CGTGGCCCGG CATGATCCAG GGCAAGTACA AGGGGTTCTT CAGGATCAGC
CTCACCTCCG GCGCGGGACA GCACGGTTCG GCGCTGCGCA AGGCGGTCGC ACTGGCAGTC
GCACCGGTCG TCGAACATGT CGCGGAGCGG CTCCGCCCGC CGATGGAGGG CTTCAACCTT
CCCCAGGCCG AACTGTTCAC CCAGGCCCTG GACGTCCCCG TCATCTGCGT CGGCGGATTC
CACACCAACG AGGGCATGGA AGCGGCCATC GGCAGCGGGA AGGTCGATGC CGTCTCGGCC
GCCCGCGCGA TGATCGCCGA CCCGTACCTG TACCGGAACG TCCTCGGAGA GGTCGCCGAC
CGGCCGATCT GCGGCTACTG CAACGGCTGC ATCGCCCGCT TCAGCGGCCT GCCCATTGAC
TGCTACAGCG CCGAGATCCG TCTCCACCGC GACGCCATGA TCGAGCGCTA CCGCGCCCGA
ACCGGCGAGT GA
 
Protein sequence
MTDQSMLATP LGIGPMTVAG RLFKSATSET RATADGFVTD ELLAFYEPMI EAGTPMIITG 
NLYVSLQGKS ARRQAGIDAD DKIPGLRDWT VLAHQHDVKI VAQLNHGGRQ IAQAAPGVDR
LVSASDIREP LYGTKPSPLR LDEMPGVVES FAAAGARARD AGFDGVQIHA AHGYLLSQFL
TPHTNRRIDA YGGSLDNRAR LLVEVLRGLR SRLGDDFPIL VKMNGTDDLP FRKGATTEEL
VGVAVRLQDE GIDAVEISRG HYESWPGMIQ GKYKGFFRIS LTSGAGQHGS ALRKAVALAV
APVVEHVAER LRPPMEGFNL PQAELFTQAL DVPVICVGGF HTNEGMEAAI GSGKVDAVSA
ARAMIADPYL YRNVLGEVAD RPICGYCNGC IARFSGLPID CYSAEIRLHR DAMIERYRAR
TGE