| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2987 |
|---|
| Symbol | |
|---|
| ID | 5671371 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 3514229 |
|---|
| End bp | 3515176 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641241891 |
|---|
| Product | amidohydrolase 2 |
|---|
| Protein accession | YP_001507311 |
|---|
| Protein GI | 158314803 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.390637 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTCGTC CCGGGCGCAT CGACGTCCAC CAGCACTTCC TGCCACCTGG CTATGCGCGA
TGGCTTGAAT CAGGCGGCAT CGCGCAGGTC GGGGGGCGGG CCATACCTGA CTGGGACGCA
GACAAGGCAA TAGGCCTGAT GGACCAGTTC TCGATCTCGA CGGGCATCCT GTCGCTGTCG
GCGCCGGGGG TGTATCTCGG TGACGGCACG GATGCTCGGA CGATGGCCAC GCAGGTCAAC
GAGGCTGCCG CCGAGTGTGT CTGGGACCGG CCAGACCGGT TCGGATTCTT CGCCACGGTC
CCGCTCCCCG ACGTCGACGG GGCGCTGGAG GCGGCTGCAC ACGCCTTCGA CTCCCTGAAC
GCCGACGGCG TGTGCCTGCT AGCGAACTAT CAGGGGATTT ACCTCGGCGA GCCGGTGTTC
GACCCGCTGA TGGCCGAACT CGACCGCCGA CACGCCGTGG TGCTTGTCCA CCCCGCCGAA
CTACCCGGGC CGGCCGTGCC CAGCATTCCT CCGTTCGCCA CAGACTTCCT GCTCGACACC
AGCCGAGCCG CGTTTAACCT TGTCCGGCAC GAGGTGCCTC GGCGCTACCC GAACATCACC
TTTATCCTCG CCCACGCCGG CGGGTTCGTC CCCTACGCCT CGCACCGCGT CGCGGTCGGC
GTGACCGCCG AGACGGGCCG AGATCCGTTC GAGGTACTTG AGGACCTGCA GGGCTTCTAC
TTCGACACGG CGCTGTCGTC CAGCCCGGCT GCGCTGCCCA CCCTGCTCGC CTTCGCCAAA
CCCGGCCACG TCCTGTTCGG CACCGACTGG CCCTTCGCGC CCGACATCGC CGTTGCTTAC
TTCACCGGAC AGCTCGACAG CTACGACGAC CTCGACAGCG ACGCGCGCGT CGCGATCAAC
CACGGCAACG TCCAAGCGCT GTTCCCCCGA CTCATAGACC AGGAGTGA
|
|---|
| Protein sequence | MIRPGRIDVH QHFLPPGYAR WLESGGIAQV GGRAIPDWDA DKAIGLMDQF SISTGILSLS
APGVYLGDGT DARTMATQVN EAAAECVWDR PDRFGFFATV PLPDVDGALE AAAHAFDSLN
ADGVCLLANY QGIYLGEPVF DPLMAELDRR HAVVLVHPAE LPGPAVPSIP PFATDFLLDT
SRAAFNLVRH EVPRRYPNIT FILAHAGGFV PYASHRVAVG VTAETGRDPF EVLEDLQGFY
FDTALSSSPA ALPTLLAFAK PGHVLFGTDW PFAPDIAVAY FTGQLDSYDD LDSDARVAIN
HGNVQALFPR LIDQE
|
|---|
| |